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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025319.1-P Field mustard plasma membrane 100.0 100.0
CDX85183 Canola cytosol, plasma membrane 89.12 96.57
CDY20032 Canola plasma membrane 86.94 86.69
AT3G28040.1 Thale cress plasma membrane 86.84 86.42
CDY00141 Canola plasma membrane 85.86 85.69
CDY68115 Canola cytosol 10.39 76.64
PGSC0003DMT400055650 Potato plasma membrane 63.7 65.45
VIT_05s0062g01070.t01 Wine grape nucleus 63.6 65.21
Solyc09g098290.2.1 Tomato plasma membrane 64.0 63.93
KRH70560 Soybean plasma membrane 63.6 63.85
KRH01549 Soybean nucleus, plasma membrane 63.4 63.65
CDY70210 Canola cytosol 12.17 58.57
CDY42780 Canola cytosol 11.97 58.17
CDX96323 Canola cytosol 12.07 58.1
GSMUA_Achr6P27930_001 Banana plasma membrane 40.36 56.12
GSMUA_Achr9P01740_001 Banana plasma membrane 42.73 56.1
GSMUA_Achr6P06620_001 Banana plasma membrane 42.83 54.67
Os01t0957100-01 Rice plasma membrane 49.65 54.39
Zm00001d042051_P001 Maize mitochondrion 52.13 50.53
HORVU3Hr1G109760.1 Barley plasma membrane 52.13 50.1
TraesCS3A01G495400.1 Wheat plasma membrane 52.13 49.86
Zm00001d011834_P001 Maize plasma membrane 51.73 49.67
KXG34152 Sorghum plasma membrane 52.82 47.72
TraesCS3D01G502600.1 Wheat plasma membrane 51.83 45.92
CDY04822 Canola plasma membrane 40.36 43.97
CDY27220 Canola plasma membrane 40.16 43.38
CDX72142 Canola plasma membrane 40.06 43.27
CDY45475 Canola cytosol 8.21 40.69
CDY30082 Canola cytosol 27.6 36.42
CDX98061 Canola plasma membrane 30.76 36.16
CDY00268 Canola plasma membrane 29.48 30.82
CDX86913 Canola plasma membrane 29.48 30.72
CDX70013 Canola plasma membrane 28.39 29.8
CDX99001 Canola plasma membrane 28.39 29.77
CDX76712 Canola plasma membrane 28.78 29.48
CDY11488 Canola plasma membrane 28.78 29.48
CDX76716 Canola plasma membrane 3.96 23.39
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.7Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078DBN8EnsemblPlants:CDX86452
ProteinID:CDX86452ProteinID:CDX86452.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00144600001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF00560PFAM:PF08263PFAM:PF13516
PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107PFscan:PS50011PFscan:PS51450PANTHER:PTHR27000
PANTHER:PTHR27000:SF221InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00365SMART:SM00369SUPFAM:SSF52058
SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000253FBCFSEG:seg:
Description
BnaA06g31690D
Coordinates
chrLK031845:-:1629433..1632623
Molecular Weight (calculated)
110877.0 Da
IEP (calculated)
7.863
GRAVY (calculated)
-0.078
Length
1011 amino acids
Sequence
(BLAST)
0001: MGEHRRKVIS FTLFLAVTLI SLINGDLDST QLNDDVLGLI VFKSDLHDPS SHLSSWNEDD ISPCSWTYVK CNPKTSRVTE LSLSGLSLTG KIGRGIQKLQ
0101: HLKVLSLSNN NLTGNIAALS NNNRLQKLDL SHNSLSGQIP SSLTSLRHLD LTGNSFSGTL SDDVFTNCSS LRHLSLSRNR FEGQIPSALF RCSVLNSLNL
0201: SSNRFSGSPS FASGFWKLQR LRTLDLSFNA LSGSIPLGML YVHNLKVLHL QGNQFYGSLP SDIGLCPHLN RVDLSFNRFS GEIPTTLQRL RYLNHLDLSK
0301: NMLSGGFPVW IGDMTGLVHL DVSSNMLTGK LPSSISNLRS LKALILSDNK LSGEIPESLE SCKELMVVQL KGNGFTGSIP DGLFDLGLQE MDFSGNGLTG
0401: SIPRGSSRLF ESLVRLDLSR NSLTGNIPGE VGLFSNLRYL NLSWNHFNTR VPPEIEFLQN LTILDLRNSA LIGSVPADIC EAQSLQILQL DGNSLTGSIP
0501: EGIGNCSSLK LLSLSHNNLS GPIPKSLSNL EELKILKLEA NKLSGEIPKE LGKLQNLLLV NISFNRLIGR LPSGGVFQSL DQSSLQGNLG ICSPLLRGPC
0601: TLNVPKPLVI DPNSYRNGNS NEEASGNRPS KFHGGMFLSV SVIVAISAAI LIVSGVIIIT LLNASVRRRL AFVDTALESI FSGSSRSGRS LEAGKLVLLN
0701: SRTSRSSSSS QEFARNPESV LNKASRIGEG VFGTVYKAPL GDQGRNLAVK KLVPSPIIEN LEDFDREVRI LAKAKHPNLV SMKGYYWTPE MQLLVSEYIP
0801: NGNLQSKLHE REPSTPPLPW DARYRIILGT AKGLAYLHHT FRPATVHFNL KPTNILLDEK YNPKISDFGL ARLLTTQDGN TMNTNRFQNA LGYVAPELEC
0901: QNLRVNEKCD VYGFGVLILE LVTGRRPVEY GEDSFVILSD HVRVLLEQGN VLECIDPTME EEYSEDEVLP VLKLALVCTS QIPSNRPTMA EIVQILQVIS
1001: SPVPHRILDS F
Best Arabidopsis Sequence Match ( AT3G28040.1 )
(BLAST)
0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF
Arabidopsis Description
Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.