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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d011834_P001 Maize plasma membrane 90.22 89.36
KXG34152 Sorghum plasma membrane 93.96 87.58
Os01t0957100-01 Rice plasma membrane 71.33 80.61
TraesCS3A01G495400.1 Wheat plasma membrane 74.02 73.04
HORVU3Hr1G109760.1 Barley plasma membrane 73.63 73.0
TraesCS3D01G502600.1 Wheat plasma membrane 74.5 68.1
GSMUA_Achr6P27930_001 Banana plasma membrane 45.25 64.92
GSMUA_Achr6P06620_001 Banana plasma membrane 48.9 64.39
GSMUA_Achr9P01740_001 Banana plasma membrane 47.27 64.03
VIT_05s0062g01070.t01 Wine grape nucleus 53.88 57.0
PGSC0003DMT400055650 Potato plasma membrane 53.12 56.3
CDY68115 Canola cytosol 7.38 56.2
Solyc09g098290.2.1 Tomato plasma membrane 53.79 55.43
KRH70560 Soybean plasma membrane 53.31 55.21
KRH01549 Soybean nucleus, plasma membrane 52.92 54.82
CDX85183 Canola cytosol, plasma membrane 48.13 53.8
Bra025319.1-P Field mustard plasma membrane 50.53 52.13
CDX86452 Canola plasma membrane 50.53 52.13
AT3G28040.1 Thale cress plasma membrane 50.62 51.97
CDY20032 Canola plasma membrane 50.05 51.48
Bra039063.1-P Field mustard plasma membrane 50.05 51.48
CDY00141 Canola plasma membrane 49.09 50.54
CDY70210 Canola cytosol 9.4 46.67
Bra029522.1-P Field mustard cytosol 9.4 46.67
CDX96323 Canola cytosol 9.3 46.19
CDY42780 Canola cytosol 9.2 46.15
Zm00001d029059_P001 Maize plasma membrane 40.84 43.83
Zm00001d043058_P001 Maize plasma membrane 38.26 42.04
Zm00001d038481_P001 Maize plasma membrane, plastid 36.63 39.18
Zm00001d027463_P001 Maize plasma membrane 31.35 36.25
Zm00001d048453_P001 Maize plastid 30.97 35.69
Zm00001d045481_P004 Maize plasma membrane 27.9 29.54
Zm00001d018261_P002 Maize plasma membrane 28.0 29.11
Zm00001d037114_P002 Maize plasma membrane 27.71 29.07
Protein Annotations
Gene3D:1.10.510.10EntrezGene:100216746Gene3D:3.30.200.20Gene3D:3.80.10.10MapMan:50.2.7EMBL:BT066922
UniProt:C0PF53GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypProteinID:ONM34380.1PFAM:PF00069
PFAM:PF08263PFAM:PF13855ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27000PANTHER:PTHR27000:SF221
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00369SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000195CB0EEnsemblPlantsGene:Zm00001d042051EnsemblPlants:Zm00001d042051_P001EnsemblPlants:Zm00001d042051_T001
SEG:seg:::::
Description
Probably inactive leucine-rich repeat receptor-like protein kinase
Coordinates
chr3:-:148707288..148711215
Molecular Weight (calculated)
109126.0 Da
IEP (calculated)
6.787
GRAVY (calculated)
0.089
Length
1043 amino acids
Sequence
(BLAST)
0001: MAATTAANSP ALLLFLLLLL IGGAPPATKA DMPMAVNEEV LGLVVFKSAL SDPTGALATW TESDATPCGW ARVECDPATS RVLRLALDGL ALSGRMPRGL
0101: DRLGALQDLS LARNNLSGPL PPGLSLLGSL RSLDLSYNAF SGPLPDDVAR LASLRYLDLT GNAFSGPLPP AFPRTLRFLV LSGNQFSGPV PEGLASGSPL
0201: LLHLNVSGNQ LSGSPDFAGA LWPLERLRTL DLSHNLFSGP VTDGIARLHN LKTLSLSGNR FFGAVPADIG RCPHLSTIDL SSNAFDGHLP DSIGQLASLV
0301: YLSASGNRLS GDVPAWLGKL AAVQHLDLSD NALTGSLPDS LGDLKALKYL SLSRNQLSGA VPASMSGCTK LAELHLRDNN LSGSIPDALF DVGLETLDVS
0401: SNALSGVLPS GSTRLAETLQ SLDLSGNQLT GGIPTEMSLF FKLRYLNLSR NDLRAPLPPE LGLLRNLTVL DLRSTGLYGA MPADLCESGS LAVLQLDGNS
0501: LSGPIPDSIG NCSSLYLLSL GHNGLTGPIP AGISELKKLE ILRLEYNNLS GEIPQQLGGL ENLLAVNISH NRLVGRLPAS GVFQSLDASA LEGNLGICSP
0601: LVAERCMMNV PKPLVLDPNE YTHGGGGDNN NMGTNGGGVG APRKRRFLSV SAMVAICAAV AIVLGVIVIT LLNVSARRRA EAAGGVGPGH GQKKEVDESV
0701: VTSSSSTTKS SPAPAPGGKG KGKLAAGKMV TFGPGSSLRS EDLVAGADAL LGKATEIGRG AFGTVYRAPV GDGRVVAVKK LAAASMVRSR EEFEREVRVL
0801: GKARHPNLLP LKGYYWTPQL QLLITDYAAR GSLEARLHGG GGGEAMTWEE RFRVLSGTAR ALAHLHHAFR PPLVHYNVKP SNIFLADAEC NPAVGEFGLA
0901: RLLADGGGRQ QVAMGGGRFQ QGGAGYVAPE LACQSLRVNE KCDIYGLGVL ILELVTGRRA VEYGDDDVVV LVDQVRALLE HGNALECVDP GMGGRVPEEE
1001: VLPVLKLGMV CTSQIPSNRP SMAEVVQILQ VIKAPVGRME GSF
Best Arabidopsis Sequence Match ( AT3G28040.1 )
(BLAST)
0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF
Arabidopsis Description
Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.