Factsheet for Bra029522.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70210	Canola	cytosol	98.57	98.57
CDX96323	Canola	cytosol	98.1	98.1
GSMUA_Achr6P27930_001	Banana	plasma membrane	45.24	13.07
Bra025319.1-P	Field mustard	plasma membrane	59.05	12.27
GSMUA_Achr6P06620_001	Banana	plasma membrane	44.76	11.87
GSMUA_Achr9P01740_001	Banana	plasma membrane	42.38	11.56
Bra039063.1-P	Field mustard	plasma membrane	55.71	11.54
VIT_05s0062g01070.t01	Wine grape	nucleus	50.48	10.75
KRH01549	Soybean	nucleus, plasma membrane	50.0	10.43
KRH70560	Soybean	plasma membrane	49.52	10.33
Os01t0957100-01	Rice	plasma membrane	45.24	10.29
PGSC0003DMT400055650	Potato	plasma membrane	48.1	10.26
Solyc09g098290.2.1	Tomato	plasma membrane	48.1	9.98
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	31.43	9.57
Zm00001d042051_P001	Maize	mitochondrion	46.67	9.4
Zm00001d011834_P001	Maize	plasma membrane	45.24	9.02
KXG34152	Sorghum	plasma membrane	46.67	8.76
HORVU3Hr1G109760.1	Barley	plasma membrane	42.86	8.56
TraesCS3A01G495400.1	Wheat	plasma membrane	42.86	8.51
TraesCS3D01G502600.1	Wheat	plasma membrane	42.86	7.89
Bra010067.1-P	Field mustard	plasma membrane	23.33	6.98
Bra007241.1-P	Field mustard	plasma membrane	30.95	6.78
Bra019768.1-P	Field mustard	plasma membrane	28.57	6.74
Bra009287.1-P	Field mustard	plasma membrane	25.24	5.66
Bra007759.1-P	Field mustard	plasma membrane	25.24	5.37

Protein Annotations

EnsemblPlants:Bra029522.1	EnsemblPlants:Bra029522.1-P	EnsemblPlantsGene:Bra029522	Gene3D:1.10.510.10	Gene3D:3.40.50.2300	InterPro:Kinase-like_dom_sf
PANTHER:PTHR27000	PANTHER:PTHR27000:SF221	SEG:seg	SUPFAM:SSF56112	UniParc:UPI000254268B	UniProt:M4EL55
MapMan:35.1	:	:	:	:	:

Description

AT3G28040 (E=2e-039) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA09:-:17386286..17387621

Molecular Weight (calculated)

23786.4 Da

IEP (calculated)

4.333

GRAVY (calculated)

-0.164

Length

210 amino acids

Sequence
(BLAST)

001: MCCTNGSFFF LDIHKPMKNT WEGSKENRLL GNICAVTTAN KAQTALELLR DNRNKFDLVI SDLEMDLTVI NHLEEEEDER GNENDDTTAH KNLVVNEKCD
101: VYGFGVLILE LLTGRRLLEY GEDSFVILSD HVRVLLEQGN VLECIDPTME EEYSEDEVLP FLKLSLVCTS QIPSNLPTMA EIVQILQAIS SPVPHRHRML
201: DSFSKSSVLI

Best Arabidopsis Sequence Match ( AT3G28040.1 )
(BLAST)

0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF

Arabidopsis Description

Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.