Factsheet for GSMUA_Achr6P06620_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 9
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P01740_001	Banana	plasma membrane	69.82	71.82
GSMUA_Achr6P27930_001	Banana	plasma membrane	60.23	65.61
CDY68115	Canola	cytosol	9.34	54.01
Os01t0957100-01	Rice	plasma membrane	57.58	49.4
Zm00001d042051_P001	Maize	mitochondrion	64.39	48.9
HORVU3Hr1G109760.1	Barley	plasma membrane	63.51	47.81
TraesCS3A01G495400.1	Wheat	plasma membrane	63.51	47.59
Zm00001d011834_P001	Maize	plasma membrane	63.13	47.48
VIT_05s0062g01070.t01	Wine grape	nucleus	58.71	47.16
PGSC0003DMT400055650	Potato	plasma membrane	57.58	46.34
KXG34152	Sorghum	plasma membrane	64.14	45.4
Solyc09g098290.2.1	Tomato	plasma membrane	57.83	45.26
KRH70560	Soybean	plasma membrane	56.94	44.79
KRH01549	Soybean	nucleus, plasma membrane	56.94	44.79
CDY70210	Canola	cytosol	11.87	44.76
Bra029522.1-P	Field mustard	cytosol	11.87	44.76
CDY42780	Canola	cytosol	11.74	44.71
CDX96323	Canola	cytosol	11.74	44.29
TraesCS3D01G502600.1	Wheat	plasma membrane	63.76	44.26
CDX86452	Canola	plasma membrane	54.67	42.83
Bra025319.1-P	Field mustard	plasma membrane	54.67	42.83
CDX85183	Canola	cytosol, plasma membrane	50.13	42.55
AT3G28040.1	Thale cress	plasma membrane	53.79	41.93
Bra039063.1-P	Field mustard	plasma membrane	53.66	41.91
CDY20032	Canola	plasma membrane	53.66	41.91
CDY00141	Canola	plasma membrane	52.4	40.97
GSMUA_Achr9P04820_001	Banana	plasma membrane	37.12	37.6
GSMUA_Achr6P32490_001	Banana	plasma membrane	36.11	37.34
GSMUA_Achr5P29680_001	Banana	plasma membrane	35.23	37.25
GSMUA_Achr1P03780_001	Banana	plasma membrane	28.54	32.71
GSMUA_Achr5P10330_001	Banana	plasma membrane	29.92	31.9
GSMUA_Achr4P19580_001	Banana	cytosol, nucleus, plasma membrane	20.96	27.76
GSMUA_Achr7P02290_001	Banana	plasma membrane	30.05	24.49
GSMUA_Achr4P19570_001	Banana	cytosol	8.84	22.44

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G06620_001	EnsemblPlants:GSMUA_Achr6P06620_001	EnsemblPlants:GSMUA_Achr6T06620_001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0T4R0	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019	PFscan:PS50011	PFscan:PS51257	PFscan:PS51450
PANTHER:PTHR27000	PANTHER:PTHR27000:SF221	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	UniParc:UPI000294CA13	SEG:seg	:	:	:

Description

Putative Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:GMGC_GENE;Acc:GSMUA_Achr6G06620_001]

Coordinates

chr6:+:4460575..4463843

Molecular Weight (calculated)

84679.3 Da

IEP (calculated)

4.913

GRAVY (calculated)

0.173

Length

792 amino acids

Sequence
(BLAST)

001: MRFTDFLLLQ ILVAVVACAV DLPAPLNDEV LGLIVFKAAL EDPTAALASW NEDDSTPCSW AHVECDPATS RVSRLALDSL SLSGPLPRGL DRLPALVALS
101: LSNNNLSGPI PPGLSLLPAL RSLDLSRNAF SGGLPDDLAR LPSIRSLDLS SNALSGPLLS SIFSNATLLD LSLNSFSGGV PEGIARLHTL KSLHLNGNRF
201: SGPIPAGVGL CPHLSSLDLS YNSFVGALPS SMRYLHSLTS LSLSNNRLSG DIPSWIGNLT AIQHLDLSDN KLTGNLPSSL GGLTDLNYLS LTTNMLTGAI
301: PDSIAGCTKL TELHLKGNGL DGSIPKGLFD LGLQTLQSLD LSDNKLTGTI PPEMALYFGL RYLNLSWNDF RTQLPPELGF FRNLSVLDLR RSALYGSIPG
401: DLCESGSLSV LQLDGNSLTG PIPEEIGNCS SLYLLSFSHN SLNGSIPASM GELKKLEILK LEFNNLSGEI PQQLGRLDNL LAVNISHNQF VGRLPPLVLD
501: PYAYINGNNN DNDVPTVANP AVRIGLLENA LESMCSSSTR STGPAVGRMV VFGPRSSLRS EDLVGGAEAL LTKATELGRG VFGTVYRASI GGGGTIASFR
601: PPIVHYNLKP TNILLDEKCE PKISDFGLVR LLQKLDKHMI SSRFQSAMGY MAPELACQSL RVNEKCDIYG FGVLILELVT GKKPVEYGED DVVILIDHVR
701: ALVEQGNAVE CVDSSMGEFP EEEVLPVLKL GLVCTSQIPS SRPSMAEVVQ ILQVIKAPLH AGLYHFPFCC SANATIVSVD HMIVDCMIIS II

Best Arabidopsis Sequence Match ( AT3G28040.1 )
(BLAST)

0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF

Arabidopsis Description

Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.