CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70210	Canola	cytosol	95.67	94.76
CDX96323	Canola	cytosol	95.19	94.29
CDY68115	Canola	cytosol	58.17	88.32
CDY45475	Canola	cytosol	18.75	19.12
GSMUA_Achr6P27930_001	Banana	plasma membrane	45.19	12.93
CDX85183	Canola	cytosol, plasma membrane	57.21	12.75
CDX86452	Canola	plasma membrane	58.17	11.97
GSMUA_Achr6P06620_001	Banana	plasma membrane	44.71	11.74
CDY20032	Canola	plasma membrane	55.77	11.44
CDY00141	Canola	plasma membrane	55.29	11.35
GSMUA_Achr9P01740_001	Banana	plasma membrane	41.83	11.3
VIT_05s0062g01070.t01	Wine grape	nucleus	50.48	10.65
KRH01549	Soybean	nucleus, plasma membrane	50.0	10.33
Os01t0957100-01	Rice	plasma membrane	45.67	10.29
KRH70560	Soybean	plasma membrane	49.52	10.23
PGSC0003DMT400055650	Potato	plasma membrane	48.08	10.16
Solyc09g098290.2.1	Tomato	plasma membrane	48.08	9.88
Zm00001d042051_P001	Maize	mitochondrion	46.15	9.2
Zm00001d011834_P001	Maize	plasma membrane	44.71	8.83
KXG34152	Sorghum	plasma membrane	46.63	8.67
HORVU3Hr1G109760.1	Barley	plasma membrane	42.79	8.46
TraesCS3A01G495400.1	Wheat	plasma membrane	42.79	8.42
CDY04822	Canola	plasma membrane	35.1	7.87
TraesCS3D01G502600.1	Wheat	plasma membrane	42.79	7.8
CDY30082	Canola	cytosol	27.88	7.57
CDX98061	Canola	plasma membrane	29.33	7.09
CDX72142	Canola	plasma membrane	31.73	7.05
CDY27220	Canola	plasma membrane	31.25	6.94
CDY00268	Canola	plasma membrane	26.44	5.69
CDX76712	Canola	plasma membrane	26.92	5.67
CDY11488	Canola	plasma membrane	26.92	5.67
CDX86913	Canola	plasma membrane	26.44	5.67
CDX99001	Canola	plasma membrane	25.96	5.6
CDX70013	Canola	plasma membrane	25.0	5.4
CDX76716	Canola	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY42780	EnsemblPlantsGene:GSBRNA2T00075338001	Gene3D:1.10.510.10	Gene3D:3.40.50.2300	InterPro:Kinase-like_dom_sf	PANTHER:PTHR27000
PANTHER:PTHR27000:SF221	ProteinID:CDY42780	ProteinID:CDY42780.1	SUPFAM:SSF56112	UniParc:UPI0004EE8C0E	UniProt:A0A078HWC1
MapMan:35.1	:	:	:	:	:

Description

BnaC01g22860DBnaC01g22860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWC1]

Coordinates

chrLK032534:+:34321..35650

Molecular Weight (calculated)

23579.4 Da

IEP (calculated)

4.313

GRAVY (calculated)

-0.047

Length

208 amino acids

Sequence
(BLAST)

001: MCCTNGSFFF LDIHKPMKNT WEGSKENRLL GNICAVTTAN KAQTALELLR DNRNKFDLVI SDLEMDLTVI NHLEVEEDER GNENDDTTAH KNLVVNEKCD
101: VYGFGVLILE LLIGRRLVEY SEDIFVILRD HVRVLLEQGN VLECIDPTIE EEYSEDEVLP FLKLALVCTS QIPSNLPTMA EIVQILQAIS SPVPHRMLDS
201: FSKNSVLI

Best Arabidopsis Sequence Match ( AT3G28040.1 )
(BLAST)

0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF

Arabidopsis Description

Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.