Factsheet for GSMUA_Achr1P03780_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P10330_001	Banana	plasma membrane	74.53	69.31
VIT_00s1764g00020.t01	Wine grape	cytosol, peroxisome	40.52	57.97
Os03t0127700-02	Rice	plasma membrane	65.27	50.62
EER95591	Sorghum	plasma membrane	64.83	50.11
Zm00001d027463_P001	Maize	plasma membrane	64.98	49.78
Zm00001d048453_P001	Maize	plastid	65.12	49.72
TraesCS4B01G320600.1	Wheat	plasma membrane	63.53	49.33
TraesCS4D01G317100.1	Wheat	plasma membrane	63.39	49.16
TraesCS5A01G491400.1	Wheat	plasma membrane	63.1	48.93
KRH77441	Soybean	plasma membrane	62.52	48.76
KRH27994	Soybean	plasma membrane	61.79	48.3
PGSC0003DMT400010074	Potato	plasma membrane	61.51	48.19
Solyc08g079740.2.1	Tomato	plasma membrane	61.07	47.85
CDY30082	Canola	cytosol	52.82	47.65
Os10t0531700-00	Rice	plasma membrane	55.28	47.63
CDY45475	Canola	cytosol	14.04	47.55
HORVU4Hr1G083020.3	Barley	plasma membrane	61.51	47.17
AT1G12460.1	Thale cress	plasma membrane	58.47	45.8
CDX98061	Canola	plasma membrane	56.87	45.7
AT1G62950.1	Thale cress	plasma membrane	58.47	45.39
Bra019768.1-P	Field mustard	plasma membrane	58.47	45.39
HORVU4Hr1G003680.1	Barley	plasma membrane	38.64	40.21
HORVU3Hr1G116330.2	Barley	cytosol, mitochondrion	31.98	32.99
GSMUA_Achr9P01740_001	Banana	plasma membrane	34.88	31.3
GSMUA_Achr6P32490_001	Banana	plasma membrane	34.3	30.94
GSMUA_Achr5P29680_001	Banana	plasma membrane	32.85	30.31
GSMUA_Achr9P04820_001	Banana	plasma membrane	33.86	29.92
GSMUA_Achr6P27930_001	Banana	plasma membrane	31.11	29.57
GSMUA_Achr6P06620_001	Banana	plasma membrane	32.71	28.54
GSMUA_Achr4P19570_001	Banana	cytosol	12.45	27.56
GSMUA_Achr7P02290_001	Banana	plasma membrane	31.69	22.53
GSMUA_Achr4P19580_001	Banana	cytosol, nucleus, plasma membrane	17.8	20.57

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G03780_001	EnsemblPlants:GSMUA_Achr1P03780_001	EnsemblPlants:GSMUA_Achr1T03780_001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0RWT6	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
PFscan:PS50011	PANTHER:PTHR45268	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296B6DF	SEG:seg	:	:

Description

Putative Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:GMGC_GENE;Acc:GSMUA_Achr1G03780_001]

Coordinates

chr1:+:3124738..3127504

Molecular Weight (calculated)

74003.0 Da

IEP (calculated)

6.573

GRAVY (calculated)

0.150

Length

691 amino acids

Sequence
(BLAST)

001: MRSRCRLFYL LVVYVAVVLL GPAPQGAGAQ NAAAAAAEKE ILLEFKGNVT SDPGGRLASW VAGGDPCRDF VGVFCNDAGA VVKILVHGAD LVGTLPASLA
101: GLRSLQIISL FGNCFSGGVP PEFAGIQTLH KLNVSRNLLS GDVPGFLGGL PGLRLLDLSY NAFSGEIPAI LFSSCVRTRF VSLSHNALSG PIPADIANCS
201: RLVGIDFNSF SGTVPFDLLS LQNLSYFNVS SNKFHGEIPE ISVCSEKLRF FDVSSNELSG RIPPSIANCR GLRFLDLGFN NLSGSIPPEI GTLNNCRFLL
301: ELDVSGNDLT GVIPDTLYNM TYLKHLDLHQ NQLNGSIPST LGQLSNLVYF DLSDNSLTGT IPDSLGGLTL LTYFNVSHNN LSGAIPLAAT IQQFGPSAFL
401: NNSLLCGPPL STPCTSGNTL VSESTPPAST GSNVIIGKLV LFSKSLPSRY EDWEAGTKAL LDKDCMVGGG SIGTVYKATF EGGVSIAVKK LETLGRIRNQ
501: EDGGRGELFW SRRFNIATGA ARALAYLHHD CRPQVLHLNI KSTNILLDEQ YEAKLSDYGL GKLLPILGSF NLTKFHMAVG YVAPELASQS LRYSDKCDVY
601: SFGVVLLEIV TGRKPVESSG AAKVVVLQDY VRGVLENRTA SDCFDRNLRG FVETELIQVL KLGLICTSEA PSRRPSMAEV VQFLESIKPN S

Best Arabidopsis Sequence Match ( AT1G12460.1 )
(BLAST)

001: MRKVHLFLVL VHFIYISTSR SDSISERDIL LQFKGSISDD PYNSLASWVS DGDLCNSFNG ITCNPQGFVD KIVLWNTSLA GTLAPGLSNL KFIRVLNLFG
101: NRFTGNLPLD YFKLQTLWTI NVSSNALSGP IPEFISELSS LRFLDLSKNG FTGEIPVSLF KFCDKTKFVS LAHNNIFGSI PASIVNCNNL VGFDFSYNNL
201: KGVLPPRICD IPVLEYISVR NNLLSGDVSE EIQKCQRLIL VDLGSNLFHG LAPFAVLTFK NITYFNVSWN RFGGEIGEIV DCSESLEFLD ASSNELTGRI
301: PTGVMGCKSL KLLDLESNKL NGSIPGSIGK MESLSVIRLG NNSIDGVIPR DIGSLEFLQV LNLHNLNLIG EVPEDISNCR VLLELDVSGN DLEGKISKKL
401: LNLTNIKILD LHRNRLNGSI PPELGNLSKV QFLDLSQNSL SGPIPSSLGS LNTLTHFNVS YNNLSGVIPP VPMIQAFGSS AFSNNPFLCG DPLVTPCNSR
501: GAAAKSRNSD ALSISVIIVI IAAAVILFGV CIVLALNLRA RKRRKDEEIL TVETTPLASS IDSSGVIIGK LVLFSKNLPS KYEDWEAGTK ALLDKENIIG
601: MGSIGSVYRA SFEGGVSIAV KKLETLGRIR NQEEFEQEIG RLGGLQHPNL SSFQGYYFSS TMQLILSEFV PNGSLYDNLH LRIFPGTSSS YGNTDLNWHR
701: RFQIALGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVMDSFGL TKKFHNAVGY IAPELAQQSL RASEKCDVYS YGVVLLELVT
801: GRKPVESPSE NQVLILRDYV RDLLETGSAS DCFDRRLREF EENELIQVMK LGLLCTSENP LKRPSMAEVV QVLESIRNGF GS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:UniProtKB/Swiss-Prot;Acc:C0LGE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.