Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G12460.1 | Thale cress | plasma membrane | 77.42 | 78.12 |
| CDY45475 | Canola | cytosol | 16.52 | 72.06 |
| VIT_00s1764g00020.t01 | Wine grape | cytosol, peroxisome | 37.08 | 68.32 |
| KRH27994 | Soybean | plasma membrane | 64.94 | 65.38 |
| KRH77441 | Soybean | plasma membrane | 65.06 | 65.35 |
| Solyc08g079740.2.1 | Tomato | plasma membrane | 61.8 | 62.36 |
| PGSC0003DMT400010074 | Potato | plasma membrane | 61.57 | 62.13 |
| GSMUA_Achr5P10330_001 | Banana | plasma membrane | 50.34 | 60.3 |
| GSMUA_Achr1P03780_001 | Banana | plasma membrane | 45.39 | 58.47 |
| Os03t0127700-02 | Rice | plasma membrane | 52.25 | 52.19 |
| EER95591 | Sorghum | plasma membrane | 51.91 | 51.68 |
| TraesCS4D01G317100.1 | Wheat | plasma membrane | 51.69 | 51.63 |
| TraesCS4B01G320600.1 | Wheat | plasma membrane | 51.57 | 51.57 |
| TraesCS5A01G491400.1 | Wheat | plasma membrane | 51.46 | 51.4 |
| Zm00001d048453_P001 | Maize | plastid | 52.13 | 51.27 |
| Zm00001d027463_P001 | Maize | plasma membrane | 51.24 | 50.55 |
| Os10t0531700-00 | Rice | plasma membrane | 44.49 | 49.38 |
| HORVU4Hr1G083020.3 | Barley | plasma membrane | 49.89 | 49.28 |
| HORVU4Hr1G003680.1 | Barley | plasma membrane | 32.7 | 43.83 |
| HORVU3Hr1G116330.2 | Barley | cytosol, mitochondrion | 28.31 | 37.61 |
| AT3G56370.1 | Thale cress | plasma membrane | 35.96 | 33.2 |
| AT5G01890.1 | Thale cress | plasma membrane | 34.27 | 31.54 |
| AT3G28040.1 | Thale cress | plasma membrane | 34.04 | 29.82 |
| AT5G62230.1 | Thale cress | plasma membrane | 30.11 | 27.74 |
| AT5G07180.1 | Thale cress | plasma membrane | 29.66 | 27.3 |
| AT2G26330.1 | Thale cress | plasma membrane | 29.89 | 27.25 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.7 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:842597 | UniProt:A0A178WK49 |
| ProteinID:AAF75806.1 | ProteinID:AEE34026.1 | ArrayExpress:AT1G62950 | EnsemblPlantsGene:AT1G62950 | RefSeq:AT1G62950 | TAIR:AT1G62950 |
| RefSeq:AT1G62950-TAIR-G | EnsemblPlants:AT1G62950.1 | TAIR:AT1G62950.1 | EMBL:FJ708667 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_176483.1 | ProteinID:OAP18606.1 | PFAM:PF00069 | PFAM:PF00560 | PFAM:PF08263 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50011 | PFscan:PS51450 |
| PANTHER:PTHR45268 | InterPro:Prot_kinase_dom | UniProt:Q9LQ11 | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF56112 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000483E9 | SEG:seg | : | : |
Description
F16P17.10 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ11]
Coordinates
chr1:+:23314871..23318234
Molecular Weight (calculated)
98077.9 Da
IEP (calculated)
6.362
GRAVY (calculated)
-0.012
Length
890 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIGKLIWVI MFIFVHIIIT SSRSFSDSII TEREILLQFK DNINDDPYNS LASWVSNADL CNSFNGVSCN QEGFVEKIVL WNTSLAGTLT PALSGLTSLR
101: VLTLFGNRIT GNLPLDYLKL QTLWKINVSS NALSGLVPEF IGDLPNLRFL DLSKNAFFGE IPNSLFKFCY KTKFVSLSHN NLSGSIPESI VNCNNLIGFD
201: FSYNGITGLL PRICDIPVLE FVSVRRNLLS GDVFEEISKC KRLSHVDIGS NSFDGVASFE VIGFKNLTYF NVSGNRFRGE IGEIVDCSES LEFLDASSNE
301: LTGNVPSGIT GCKSLKLLDL ESNRLNGSVP VGMGKMEKLS VIRLGDNFID GKLPLELGNL EYLQVLNLHN LNLVGEIPED LSNCRLLLEL DVSGNGLEGE
401: IPKNLLNLTN LEILDLHRNR ISGNIPPNLG SLSRIQFLDL SENLLSGPIP SSLENLKRLT HFNVSYNNLS GIIPKIQASG ASSFSNNPFL CGDPLETPCN
501: ALRTGSRSRK TKALSTSVII VIIAAAAILV GICLVLVLNL RARKRRKKRE EEIVTFDTTT PTQASTESGN GGVTFGKLVL FSKSLPSKYE DWEAGTKALL
601: DKDNIIGIGS IGAVYRASFE GGVSIAVKKL ETLGRIRNQE EFEQEIGRLG SLSHPNLASF QGYYFSSTMQ LILSEFVTNG SLYDNLHPRV SHRTSSSSSS
701: HGNTELNWHR RFQIAVGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVLNSSGL TKFHNAVGYI APELAQSLRV SDKCDVYSYG
801: VVLLELVTGR KPVESPSENE VVILRDHVRN LLETGSASDC FDRRLRGFEE NELIQVMKLG LICTTENPLK RPSIAEVVQV LELIRNGMES
101: VLTLFGNRIT GNLPLDYLKL QTLWKINVSS NALSGLVPEF IGDLPNLRFL DLSKNAFFGE IPNSLFKFCY KTKFVSLSHN NLSGSIPESI VNCNNLIGFD
201: FSYNGITGLL PRICDIPVLE FVSVRRNLLS GDVFEEISKC KRLSHVDIGS NSFDGVASFE VIGFKNLTYF NVSGNRFRGE IGEIVDCSES LEFLDASSNE
301: LTGNVPSGIT GCKSLKLLDL ESNRLNGSVP VGMGKMEKLS VIRLGDNFID GKLPLELGNL EYLQVLNLHN LNLVGEIPED LSNCRLLLEL DVSGNGLEGE
401: IPKNLLNLTN LEILDLHRNR ISGNIPPNLG SLSRIQFLDL SENLLSGPIP SSLENLKRLT HFNVSYNNLS GIIPKIQASG ASSFSNNPFL CGDPLETPCN
501: ALRTGSRSRK TKALSTSVII VIIAAAAILV GICLVLVLNL RARKRRKKRE EEIVTFDTTT PTQASTESGN GGVTFGKLVL FSKSLPSKYE DWEAGTKALL
601: DKDNIIGIGS IGAVYRASFE GGVSIAVKKL ETLGRIRNQE EFEQEIGRLG SLSHPNLASF QGYYFSSTMQ LILSEFVTNG SLYDNLHPRV SHRTSSSSSS
701: HGNTELNWHR RFQIAVGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVLNSSGL TKFHNAVGYI APELAQSLRV SDKCDVYSYG
801: VVLLELVTGR KPVESPSENE VVILRDHVRN LLETGSASDC FDRRLRGFEE NELIQVMKLG LICTTENPLK RPSIAEVVQV LELIRNGMES
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.