Factsheet for Zm00001d048453_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027463_P001	Maize	plasma membrane	89.39	89.69
TraesCS4B01G320600.1	Wheat	plasma membrane	77.57	78.88
TraesCS4D01G317100.1	Wheat	plasma membrane	77.46	78.68
Os03t0127700-02	Rice	plasma membrane	77.46	78.68
TraesCS5A01G491400.1	Wheat	plasma membrane	77.35	78.56
HORVU4Hr1G083020.3	Barley	plasma membrane	75.14	75.47
HORVU4Hr1G003680.1	Barley	plasma membrane	50.06	68.22
GSMUA_Achr1P03780_001	Banana	plasma membrane	49.72	65.12
VIT_00s1764g00020.t01	Wine grape	cytosol, peroxisome	34.25	64.18
GSMUA_Achr5P10330_001	Banana	plasma membrane	51.82	63.12
HORVU3Hr1G116330.2	Barley	cytosol, mitochondrion	42.1	56.87
KRH77441	Soybean	plasma membrane	53.92	55.08
KRH27994	Soybean	plasma membrane	53.59	54.86
CDY30082	Canola	cytosol	46.41	54.83
PGSC0003DMT400010074	Potato	plasma membrane	52.38	53.74
Solyc08g079740.2.1	Tomato	plasma membrane	52.15	53.51
AT1G12460.1	Thale cress	plasma membrane	51.93	53.29
CDY45475	Canola	cytosol	11.93	52.94
Bra019768.1-P	Field mustard	plasma membrane	51.6	52.47
CDX98061	Canola	plasma membrane	49.83	52.44
AT1G62950.1	Thale cress	plasma membrane	51.27	52.13
Zm00001d029059_P001	Maize	plasma membrane	38.23	35.6
Zm00001d043058_P001	Maize	plasma membrane	35.36	33.72
Zm00001d038481_P001	Maize	plasma membrane, plastid	34.92	32.41
Zm00001d042051_P001	Maize	mitochondrion	35.69	30.97
Zm00001d011834_P001	Maize	plasma membrane	36.02	30.96
Zm00001d045481_P004	Maize	plasma membrane	31.71	29.14
Zm00001d037114_P002	Maize	plasma membrane	31.93	29.07
Zm00001d018261_P002	Maize	plasma membrane	31.71	28.61

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:103639592	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1D6PKP9
ProteinID:AQL09820.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13516
PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR45268	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004DEAC3D	EnsemblPlantsGene:Zm00001d048453	EnsemblPlants:Zm00001d048453_P001	EnsemblPlants:Zm00001d048453_T001
SEG:seg	:	:	:	:	:

Description

Putative leucine-rich repeat transmembrane protein kinase family protein

Coordinates

chr9:-:156669559..156672753

Molecular Weight (calculated)

95969.0 Da

IEP (calculated)

7.459

GRAVY (calculated)

0.158

Length

905 amino acids

Sequence
(BLAST)

001: MTRRPASSAP SAARLLLLLL LLLLLHCQCH RAGAATDAER RALLDFKAAV TADPGGVLAS WTPTGDPCGF VGVTCDASTG AVKRLRVHGA GLAGALSPSL
101: ARLPALESVS LFGNALTGGV PPSLRLLAPT LRKLNLSRNA LAGEIPPFLG AFPWLRLLDL SHNRFAGGIP AALFDPCPRL RYVSLAHNHL TGPVPPAIAN
201: CSRLAGFDFS YNRLSGEFPD RACAPPEMSY ISVRGNALSG DIAAKLASCG SIDLFDVGSN SFTGAAPFAL LASVNITYFN VSSNAFDGEI PSIATCGTRF
301: SYLDASGNRL TGPVPESVVN CRGLRVLDLG ANALAGAVPP VIGTLRSLSV LRLAGNPRIS GSIPAELGGI EMLVTLDLAG LALTGEIPGS LSQCQFLLEL
401: NLSGNKLQGV IPGTLNNITY LKMLDLHGNQ LQGGIPVTLG QLTNLVLLDL SENQLTGPIP QELGNLSNLT HFNVSFNNLS GMIPSEPALQ KFDFTAYMDN
501: PLLCGSPLPN NCGPGTGMKH RKRLRVPVII AIVAAALILV GICIVCALNI KAYTRKGTDG DGKEEEEVLV SESTPPAASP GSNAIIGKLV LFSKSLPSRY
601: EDWETGTKAL LDKDCLIGGG SIGTVYKATF ENGLSIAVKK LETAGRVRGQ DEFEHQMSQL GNLSHPNLVA FQGYYWSSSM QLLLSEFMAN GSLYDHLHGY
701: RPPPRALSES SSSSRGGGGE LFWERRFNIA LGAARALAYL HHDCWPQILH LNIKSSNIML DGRYEARLSD YGLGKLLPIL GSIELSRIHT AIGYIAPELA
801: SPTLRYSDKS DVFSFGVVLL EIVTGRKPVD SPGIGATAVV LRDYVRGILE DGTASDCFDR SLRGFVEAEL VQVLKLGLVC TSNTPSSRPS MAEVVQFLES
901: VRVSS

Best Arabidopsis Sequence Match ( AT1G12460.1 )
(BLAST)

001: MRKVHLFLVL VHFIYISTSR SDSISERDIL LQFKGSISDD PYNSLASWVS DGDLCNSFNG ITCNPQGFVD KIVLWNTSLA GTLAPGLSNL KFIRVLNLFG
101: NRFTGNLPLD YFKLQTLWTI NVSSNALSGP IPEFISELSS LRFLDLSKNG FTGEIPVSLF KFCDKTKFVS LAHNNIFGSI PASIVNCNNL VGFDFSYNNL
201: KGVLPPRICD IPVLEYISVR NNLLSGDVSE EIQKCQRLIL VDLGSNLFHG LAPFAVLTFK NITYFNVSWN RFGGEIGEIV DCSESLEFLD ASSNELTGRI
301: PTGVMGCKSL KLLDLESNKL NGSIPGSIGK MESLSVIRLG NNSIDGVIPR DIGSLEFLQV LNLHNLNLIG EVPEDISNCR VLLELDVSGN DLEGKISKKL
401: LNLTNIKILD LHRNRLNGSI PPELGNLSKV QFLDLSQNSL SGPIPSSLGS LNTLTHFNVS YNNLSGVIPP VPMIQAFGSS AFSNNPFLCG DPLVTPCNSR
501: GAAAKSRNSD ALSISVIIVI IAAAVILFGV CIVLALNLRA RKRRKDEEIL TVETTPLASS IDSSGVIIGK LVLFSKNLPS KYEDWEAGTK ALLDKENIIG
601: MGSIGSVYRA SFEGGVSIAV KKLETLGRIR NQEEFEQEIG RLGGLQHPNL SSFQGYYFSS TMQLILSEFV PNGSLYDNLH LRIFPGTSSS YGNTDLNWHR
701: RFQIALGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVMDSFGL TKKFHNAVGY IAPELAQQSL RASEKCDVYS YGVVLLELVT
801: GRKPVESPSE NQVLILRDYV RDLLETGSAS DCFDRRLREF EENELIQVMK LGLLCTSENP LKRPSMAEVV QVLESIRNGF GS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:UniProtKB/Swiss-Prot;Acc:C0LGE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.