Factsheet for Bra019768.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98061	Canola	plasma membrane	93.26	96.51
AT1G12460.1	Thale cress	plasma membrane	84.04	84.81
VIT_00s1764g00020.t01	Wine grape	cytosol, peroxisome	37.19	68.53
KRH77441	Soybean	plasma membrane	63.48	63.77
KRH27994	Soybean	plasma membrane	62.81	63.24
PGSC0003DMT400010074	Potato	plasma membrane	62.47	63.04
Solyc08g079740.2.1	Tomato	plasma membrane	62.13	62.7
GSMUA_Achr5P10330_001	Banana	plasma membrane	49.21	58.95
GSMUA_Achr1P03780_001	Banana	plasma membrane	45.39	58.47
Os03t0127700-02	Rice	plasma membrane	53.48	53.42
TraesCS4D01G317100.1	Wheat	plasma membrane	52.7	52.64
EER95591	Sorghum	plasma membrane	52.7	52.46
TraesCS5A01G491400.1	Wheat	plasma membrane	52.47	52.41
TraesCS4B01G320600.1	Wheat	plasma membrane	52.25	52.25
Zm00001d048453_P001	Maize	plastid	52.47	51.6
Zm00001d027463_P001	Maize	plasma membrane	52.13	51.44
Os10t0531700-00	Rice	plasma membrane	45.62	50.62
HORVU4Hr1G083020.3	Barley	plasma membrane	51.12	50.5
HORVU4Hr1G003680.1	Barley	plasma membrane	33.71	45.18
HORVU3Hr1G116330.2	Barley	cytosol, mitochondrion	29.89	39.7
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	28.43	36.67
Bra007241.1-P	Field mustard	plasma membrane	37.3	34.62
Bra025319.1-P	Field mustard	plasma membrane	35.62	31.36
Bra039063.1-P	Field mustard	plasma membrane	35.06	30.77
Bra029522.1-P	Field mustard	cytosol	6.74	28.57
Bra007759.1-P	Field mustard	plasma membrane	30.11	27.15
Bra009287.1-P	Field mustard	plasma membrane	28.43	27.03
Bra010067.1-P	Field mustard	plasma membrane	21.24	26.92

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra019768	EnsemblPlants:Bra019768.1
EnsemblPlants:Bra019768.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
UniProt:M4DTC5	PFAM:PF07714	PFAM:PF08263	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR45268
InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000253ECE8	SEG:seg	:	:	:

Description

AT1G12460 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA06:-:4523247..4525992

Molecular Weight (calculated)

97018.2 Da

IEP (calculated)

5.171

GRAVY (calculated)

-0.017

Length

890 amino acids

Sequence
(BLAST)

001: MKRFYLFLVL VYISTSPCYS LVTIEEERDI LLQFKDSITD DPYNSLASWT LDGDICNSFN GVTCNPEGFV DKIVLWNTSL AGRLSPRLSG LNSIRVLTLF
101: GNRFTGNLPL DYSKLQTLWT INVSSNALSG SIPEFIGGLT SLRFLDLSRN GFSGEIPTSL FRFCDKTKFV SLSRNNLSGP IPGSVANCNN LVGFDFSYNS
201: LNGVLPPGVC DIPVLEYISV RNNLLSGDVS EEVVKCQRLS HVDLGSNMFQ GSGPFEVLGF VNITYVNVSW NRFGGEIGEV VGCGQRLEFL DASYNELTGG
301: ISRGVTGCKS LKLLDLESNK INGSIPGGIG KMEKLSVVRL GGNSIDGEIP KEIGSLEYLQ VLNLHDLNLV GEVPEDVSNC RLLLELDVSG NGLEGEIPKK
401: LLNLTNLEIL DLHGNRINGS IPSELGSLSR IQFLDLSLNS LSGSIPSSLG SLNKLTHFNV SHNNLSGVIP PAPVLQAFGA SAFENNPLLC GDPLVTTPCN
501: SRGATAKGRN SEALSVSVII VIVAAAVILF GVCLVLGLNL RARKRRKDEE EEEVVTLETT PLASSIDSSG GGVIIGKLVL FSKNLPSKYE DWEAGTKALL
601: DKDNIIGMGS IGSVYRASFE GGVSIAVKKL DTLGRIRNQE EFEQELGRLG GLQHQNLSSY QGYYFSSTMQ LILSDFVPNG SLYDNLHSRI YPGASTSHGN
701: TDLNWHMRFG IALGTAKALS FLHDDCKPAV LHLNVKSTNI LLDEKYEAKL SDYGLEKFLP VLDSFGSRTK KFHNAVGYIA PELAQQSLKA SEKCDVYSYG
801: VVLLELVTGR KPVESPSRNQ VLILRDYVRD MLETGSASDC FDRRLREFEE NELIQVMKLG LLCTSENPLK RPSMAEVVQV LESIRNGFGS

Best Arabidopsis Sequence Match ( AT1G12460.1 )
(BLAST)

001: MRKVHLFLVL VHFIYISTSR SDSISERDIL LQFKGSISDD PYNSLASWVS DGDLCNSFNG ITCNPQGFVD KIVLWNTSLA GTLAPGLSNL KFIRVLNLFG
101: NRFTGNLPLD YFKLQTLWTI NVSSNALSGP IPEFISELSS LRFLDLSKNG FTGEIPVSLF KFCDKTKFVS LAHNNIFGSI PASIVNCNNL VGFDFSYNNL
201: KGVLPPRICD IPVLEYISVR NNLLSGDVSE EIQKCQRLIL VDLGSNLFHG LAPFAVLTFK NITYFNVSWN RFGGEIGEIV DCSESLEFLD ASSNELTGRI
301: PTGVMGCKSL KLLDLESNKL NGSIPGSIGK MESLSVIRLG NNSIDGVIPR DIGSLEFLQV LNLHNLNLIG EVPEDISNCR VLLELDVSGN DLEGKISKKL
401: LNLTNIKILD LHRNRLNGSI PPELGNLSKV QFLDLSQNSL SGPIPSSLGS LNTLTHFNVS YNNLSGVIPP VPMIQAFGSS AFSNNPFLCG DPLVTPCNSR
501: GAAAKSRNSD ALSISVIIVI IAAAVILFGV CIVLALNLRA RKRRKDEEIL TVETTPLASS IDSSGVIIGK LVLFSKNLPS KYEDWEAGTK ALLDKENIIG
601: MGSIGSVYRA SFEGGVSIAV KKLETLGRIR NQEEFEQEIG RLGGLQHPNL SSFQGYYFSS TMQLILSEFV PNGSLYDNLH LRIFPGTSSS YGNTDLNWHR
701: RFQIALGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVMDSFGL TKKFHNAVGY IAPELAQQSL RASEKCDVYS YGVVLLELVT
801: GRKPVESPSE NQVLILRDYV RDLLETGSAS DCFDRRLREF EENELIQVMK LGLLCTSENP LKRPSMAEVV QVLESIRNGF GS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:UniProtKB/Swiss-Prot;Acc:C0LGE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.