Factsheet for Bra039063.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20032	Canola	plasma membrane	98.52	98.52
Bra025319.1-P	Field mustard	plasma membrane	86.19	86.45
AT3G28040.1	Thale cress	plasma membrane	83.73	83.56
PGSC0003DMT400055650	Potato	plasma membrane	61.64	63.52
KRH70560	Soybean	plasma membrane	62.43	62.86
KRH01549	Soybean	nucleus, plasma membrane	62.43	62.86
VIT_05s0062g01070.t01	Wine grape	nucleus	60.85	62.58
Solyc09g098290.2.1	Tomato	plasma membrane	61.83	61.96
GSMUA_Achr9P01740_001	Banana	plasma membrane	42.5	55.97
Bra029522.1-P	Field mustard	cytosol	11.54	55.71
GSMUA_Achr6P27930_001	Banana	plasma membrane	39.35	54.88
GSMUA_Achr6P06620_001	Banana	plasma membrane	41.91	53.66
Os01t0957100-01	Rice	plasma membrane	48.72	53.52
Zm00001d042051_P001	Maize	mitochondrion	51.48	50.05
HORVU3Hr1G109760.1	Barley	plasma membrane	51.28	49.43
TraesCS3A01G495400.1	Wheat	plasma membrane	51.18	49.1
Zm00001d011834_P001	Maize	plasma membrane	50.69	48.81
KXG34152	Sorghum	plasma membrane	52.17	47.27
TraesCS3D01G502600.1	Wheat	plasma membrane	50.99	45.31
Bra007241.1-P	Field mustard	plasma membrane	40.53	42.86
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	28.4	41.74
Bra019768.1-P	Field mustard	plasma membrane	30.77	35.06
Bra010067.1-P	Field mustard	plasma membrane	21.2	30.63
Bra009287.1-P	Field mustard	plasma membrane	27.22	29.49
Bra007759.1-P	Field mustard	plasma membrane	28.11	28.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra039063	EnsemblPlants:Bra039063.1
EnsemblPlants:Bra039063.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4FD93	PFAM:PF00069	PFAM:PF00560
PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF221	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002541BA1
SEG:seg	:	:	:	:	:

Description

AT3G28040 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA09:+:1313594..1316720

Molecular Weight (calculated)

110938.0 Da

IEP (calculated)

7.940

GRAVY (calculated)

-0.076

Length

1014 amino acids

Sequence
(BLAST)

0001: MGDHRRKAIS VTLFLAMTLI SLTNGDTNSI QLNDDVLGLI VLKSDLHDPS SHLASWNEDD ASPCSWSYVK CNPKTSRVTE LSLSGLGLTG KIGRGIQKLQ
0101: HLKTLSLSNN NFTGNIMSLS NNNNLQKLDL SHNNLSGTIP SSLGSIKYLD LTGNSFSGTL SNDLFTNCSS LTYLSLSHNR FEGELPSTLS RCSVLNTLNL
0201: SSNRFSGNPS FVSVLWKLER LRTLDLSFNA LSGTLPLGIL SLHSLKVLQL QGNRFSGPLP SDIGLCPHLN TVDLSFNRFY GEVPTTLQRL KSLNHLDLSK
0301: NFLSSGFPVW IGDMTGLVHL DVSRNELTGA IPSSVGSLRS LKVIILSENK LSGEIPESLE SCKELVSVQL KGNGFVGSIP DGLFNLGLQE IDFSGNGLTS
0401: SIPRGSSRLF ESLVTLDLSC NSLTGNIPGE VGLFSNLRYL NLSWNKFNTR VPPEIEFLQN LTVLDLRNNA LIGSVPADIC EPQSLEILQL DGNSLTGSIP
0501: EGIGNCSSLK LLSLSHNNLT GPIPKSLSKL QQLKILKLEA NKLSGEIPKE LGGLHNLLLV NISFNRLIGR LPNGGVFQRL DQSALQGNLG ICSPLLRGPC
0601: RMNVSKPIVI DPNSYGNRNN NEGRHGNRTS NGSSKYHNGM FLSVSVVVAI SAAILIFLGV IIVTLLNASV RRKLAFVDNA LDSIFSGSSR SGRSLVAGKL
0701: VMLNSRTSWS SSSSQEFARN PESHLNKASR IGEGVFGTVY KAPLGEQGSN LAVKKLVLSP IIENLEDFDR EVRILAKAKH PNLVLIKGYY WTPETQLLVS
0801: EYIPNGNLHS KLHGREPSTP PLSWDARYRI ILGTAKGLAY LHHTCRPTTI HFNLKPSNIL LDEKYNPKIS DFGLSRLVTQ DGNTMNNNRF QNALGYMAPE
0901: LECQNLRVNE KCDVYGFGVL ILELVTGRRP VEYGEDIFVI LSDHVRIMLE QGNVLECIDP TMEDEYSEDE VLPVVKLALV CTSQIPSNRP TMAEIVQILQ
1001: VITSPVPHRM LDSF

Best Arabidopsis Sequence Match ( AT3G28040.1 )
(BLAST)

0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF

Arabidopsis Description

Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.