Factsheet for AT3G28040.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85183	Canola	cytosol, plasma membrane	80.02	87.14
Bra025319.1-P	Field mustard	plasma membrane	86.42	86.84
CDX86452	Canola	plasma membrane	86.42	86.84
CDY20032	Canola	plasma membrane	84.06	84.22
Bra039063.1-P	Field mustard	plasma membrane	83.56	83.73
CDY00141	Canola	plasma membrane	83.17	83.42
PGSC0003DMT400055650	Potato	plasma membrane	62.89	64.94
VIT_05s0062g01070.t01	Wine grape	nucleus	62.89	64.81
Solyc09g098290.2.1	Tomato	plasma membrane	63.48	63.74
KRH70560	Soybean	plasma membrane	62.5	63.06
KRH01549	Soybean	nucleus, plasma membrane	62.4	62.96
GSMUA_Achr9P01740_001	Banana	plasma membrane	42.42	55.97
GSMUA_Achr6P27930_001	Banana	plasma membrane	39.76	55.57
Os01t0957100-01	Rice	plasma membrane	49.31	54.28
GSMUA_Achr6P06620_001	Banana	plasma membrane	41.93	53.79
Zm00001d042051_P001	Maize	mitochondrion	51.97	50.62
TraesCS3A01G495400.1	Wheat	plasma membrane	52.07	50.05
HORVU3Hr1G109760.1	Barley	plasma membrane	51.67	49.9
Zm00001d011834_P001	Maize	plasma membrane	51.48	49.67
KXG34152	Sorghum	plasma membrane	52.76	47.9
TraesCS3D01G502600.1	Wheat	plasma membrane	51.87	46.19
AT3G56370.1	Thale cress	plasma membrane	41.24	43.46
AT5G01890.1	Thale cress	plasma membrane	39.96	41.99
AT1G12460.1	Thale cress	plasma membrane	31.5	36.28
AT1G62950.1	Thale cress	plasma membrane	29.82	34.04
AT5G62230.1	Thale cress	plasma membrane	28.64	30.12
AT2G26330.1	Thale cress	plasma membrane	28.05	29.2
AT5G07180.1	Thale cress	plasma membrane	27.56	28.96

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:822428	ProteinID:AEE77394.1
ArrayExpress:AT3G28040	EnsemblPlantsGene:AT3G28040	RefSeq:AT3G28040	TAIR:AT3G28040	RefSeq:AT3G28040-TAIR-G	EnsemblPlants:AT3G28040.1
TAIR:AT3G28040.1	Unigene:At.28161	ProteinID:BAB01126.1	EMBL:FJ708729	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
RefSeq:NP_189443.2	PFAM:PF00069	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF221
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q9LRT1	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000009F7A4	SEG:seg	:	:

Description

Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRT1]

Coordinates

chr3:+:10434924..10438484

Molecular Weight (calculated)

111939.0 Da

IEP (calculated)

7.035

GRAVY (calculated)

-0.129

Length

1016 amino acids

Sequence
(BLAST)

0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.