Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30082 | Canola | cytosol | 74.83 | 86.16 |
| Bra019768.1-P | Field mustard | plasma membrane | 84.81 | 84.04 |
| CDX98061 | Canola | plasma membrane | 81.75 | 83.84 |
| AT1G62950.1 | Thale cress | plasma membrane | 78.12 | 77.42 |
| VIT_00s1764g00020.t01 | Wine grape | cytosol, peroxisome | 38.32 | 69.98 |
| KRH77441 | Soybean | plasma membrane | 65.87 | 65.58 |
| KRH27994 | Soybean | plasma membrane | 65.65 | 65.5 |
| PGSC0003DMT400010074 | Potato | plasma membrane | 63.15 | 63.15 |
| Solyc08g079740.2.1 | Tomato | plasma membrane | 63.04 | 63.04 |
| GSMUA_Achr5P10330_001 | Banana | plasma membrane | 50.0 | 59.35 |
| GSMUA_Achr1P03780_001 | Banana | plasma membrane | 45.8 | 58.47 |
| Os03t0127700-02 | Rice | plasma membrane | 54.54 | 53.98 |
| TraesCS4D01G317100.1 | Wheat | plasma membrane | 53.51 | 52.97 |
| EER95591 | Sorghum | plasma membrane | 53.63 | 52.91 |
| TraesCS5A01G491400.1 | Wheat | plasma membrane | 53.29 | 52.75 |
| TraesCS4B01G320600.1 | Wheat | plasma membrane | 53.06 | 52.58 |
| Zm00001d027463_P001 | Maize | plasma membrane | 53.17 | 52.0 |
| Zm00001d048453_P001 | Maize | plastid | 53.29 | 51.93 |
| Os10t0531700-00 | Rice | plasma membrane | 46.15 | 50.75 |
| HORVU4Hr1G083020.3 | Barley | plasma membrane | 51.81 | 50.72 |
| HORVU4Hr1G003680.1 | Barley | plasma membrane | 33.79 | 44.88 |
| HORVU3Hr1G116330.2 | Barley | cytosol, mitochondrion | 29.71 | 39.1 |
| AT3G56370.1 | Thale cress | plasma membrane | 36.17 | 33.09 |
| AT5G01890.1 | Thale cress | plasma membrane | 35.6 | 32.47 |
| AT3G28040.1 | Thale cress | plasma membrane | 36.28 | 31.5 |
| AT5G62230.1 | Thale cress | plasma membrane | 30.16 | 27.54 |
| AT2G26330.1 | Thale cress | plasma membrane | 30.27 | 27.36 |
| AT5G07180.1 | Thale cress | plasma membrane | 29.71 | 27.09 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.7 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:837803 | ProteinID:AAF79640.1 |
| ProteinID:AAF88073.1 | ProteinID:AEE28886.1 | EMBL:AK317750 | ArrayExpress:AT1G12460 | EnsemblPlantsGene:AT1G12460 | RefSeq:AT1G12460 |
| TAIR:AT1G12460 | RefSeq:AT1G12460-TAIR-G | EnsemblPlants:AT1G12460.1 | TAIR:AT1G12460.1 | Unigene:At.42074 | EMBL:BT002951 |
| UniProt:C0LGE4 | EMBL:FJ708633 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_172708.1 |
| PFAM:PF00069 | PFAM:PF08263 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 |
| PFscan:PS50011 | PANTHER:PTHR45268 | InterPro:Prot_kinase_dom | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF56112 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000162D43 | SEG:seg | : | : |
Description
Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:UniProtKB/Swiss-Prot;Acc:C0LGE4]
Coordinates
chr1:+:4247218..4250758
Molecular Weight (calculated)
97027.9 Da
IEP (calculated)
6.220
GRAVY (calculated)
0.050
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKVHLFLVL VHFIYISTSR SDSISERDIL LQFKGSISDD PYNSLASWVS DGDLCNSFNG ITCNPQGFVD KIVLWNTSLA GTLAPGLSNL KFIRVLNLFG
101: NRFTGNLPLD YFKLQTLWTI NVSSNALSGP IPEFISELSS LRFLDLSKNG FTGEIPVSLF KFCDKTKFVS LAHNNIFGSI PASIVNCNNL VGFDFSYNNL
201: KGVLPPRICD IPVLEYISVR NNLLSGDVSE EIQKCQRLIL VDLGSNLFHG LAPFAVLTFK NITYFNVSWN RFGGEIGEIV DCSESLEFLD ASSNELTGRI
301: PTGVMGCKSL KLLDLESNKL NGSIPGSIGK MESLSVIRLG NNSIDGVIPR DIGSLEFLQV LNLHNLNLIG EVPEDISNCR VLLELDVSGN DLEGKISKKL
401: LNLTNIKILD LHRNRLNGSI PPELGNLSKV QFLDLSQNSL SGPIPSSLGS LNTLTHFNVS YNNLSGVIPP VPMIQAFGSS AFSNNPFLCG DPLVTPCNSR
501: GAAAKSRNSD ALSISVIIVI IAAAVILFGV CIVLALNLRA RKRRKDEEIL TVETTPLASS IDSSGVIIGK LVLFSKNLPS KYEDWEAGTK ALLDKENIIG
601: MGSIGSVYRA SFEGGVSIAV KKLETLGRIR NQEEFEQEIG RLGGLQHPNL SSFQGYYFSS TMQLILSEFV PNGSLYDNLH LRIFPGTSSS YGNTDLNWHR
701: RFQIALGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVMDSFGL TKKFHNAVGY IAPELAQQSL RASEKCDVYS YGVVLLELVT
801: GRKPVESPSE NQVLILRDYV RDLLETGSAS DCFDRRLREF EENELIQVMK LGLLCTSENP LKRPSMAEVV QVLESIRNGF GS
101: NRFTGNLPLD YFKLQTLWTI NVSSNALSGP IPEFISELSS LRFLDLSKNG FTGEIPVSLF KFCDKTKFVS LAHNNIFGSI PASIVNCNNL VGFDFSYNNL
201: KGVLPPRICD IPVLEYISVR NNLLSGDVSE EIQKCQRLIL VDLGSNLFHG LAPFAVLTFK NITYFNVSWN RFGGEIGEIV DCSESLEFLD ASSNELTGRI
301: PTGVMGCKSL KLLDLESNKL NGSIPGSIGK MESLSVIRLG NNSIDGVIPR DIGSLEFLQV LNLHNLNLIG EVPEDISNCR VLLELDVSGN DLEGKISKKL
401: LNLTNIKILD LHRNRLNGSI PPELGNLSKV QFLDLSQNSL SGPIPSSLGS LNTLTHFNVS YNNLSGVIPP VPMIQAFGSS AFSNNPFLCG DPLVTPCNSR
501: GAAAKSRNSD ALSISVIIVI IAAAVILFGV CIVLALNLRA RKRRKDEEIL TVETTPLASS IDSSGVIIGK LVLFSKNLPS KYEDWEAGTK ALLDKENIIG
601: MGSIGSVYRA SFEGGVSIAV KKLETLGRIR NQEEFEQEIG RLGGLQHPNL SSFQGYYFSS TMQLILSEFV PNGSLYDNLH LRIFPGTSSS YGNTDLNWHR
701: RFQIALGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVMDSFGL TKKFHNAVGY IAPELAQQSL RASEKCDVYS YGVVLLELVT
801: GRKPVESPSE NQVLILRDYV RDLLETGSAS DCFDRRLREF EENELIQVMK LGLLCTSENP LKRPSMAEVV QVLESIRNGF GS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.