Factsheet for Solyc08g079740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010074	Potato	plasma membrane	97.51	97.51
VIT_00s1764g00020.t01	Wine grape	cytosol, peroxisome	42.18	77.02
KRH27994	Soybean	plasma membrane	68.37	68.21
KRH77441	Soybean	plasma membrane	68.37	68.06
CDY30082	Canola	cytosol	55.33	63.71
CDX98061	Canola	plasma membrane	61.68	63.26
AT1G12460.1	Thale cress	plasma membrane	63.04	63.04
Bra019768.1-P	Field mustard	plasma membrane	62.7	62.13
AT1G62950.1	Thale cress	plasma membrane	62.36	61.8
GSMUA_Achr5P10330_001	Banana	plasma membrane	51.81	61.51
GSMUA_Achr1P03780_001	Banana	plasma membrane	47.85	61.07
CDY45475	Canola	cytosol	13.38	57.84
Os03t0127700-02	Rice	plasma membrane	54.54	53.98
TraesCS4D01G317100.1	Wheat	plasma membrane	53.97	53.42
TraesCS4B01G320600.1	Wheat	plasma membrane	53.63	53.15
TraesCS5A01G491400.1	Wheat	plasma membrane	53.51	52.97
EER95591	Sorghum	plasma membrane	53.17	52.46
Os10t0531700-00	Rice	plasma membrane	47.51	52.24
Zm00001d048453_P001	Maize	plastid	53.51	52.15
Zm00001d027463_P001	Maize	plasma membrane	52.83	51.66
HORVU4Hr1G083020.3	Barley	plasma membrane	52.72	51.61
HORVU4Hr1G003680.1	Barley	plasma membrane	34.81	46.23
HORVU3Hr1G116330.2	Barley	cytosol, mitochondrion	31.29	41.19
Solyc06g048950.2.1	Tomato	plasma membrane	38.55	38.03
Solyc06g048620.2.1	Tomato	plasma membrane	40.02	36.35
Solyc09g015520.2.1	Tomato	plasma membrane	37.53	34.3
Solyc09g098290.2.1	Tomato	plasma membrane	36.39	31.72
Solyc03g007050.2.1	Tomato	extracellular	31.86	28.82
Solyc08g061560.2.1	Tomato	plasma membrane	31.86	28.38

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	UniProt:K4CNX4	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR45268
InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc08g079740.2
EnsemblPlants:Solyc08g079740.2.1	TMHMM:TMhelix	UniParc:UPI000276B306	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:+:63232063..63235307

Molecular Weight (calculated)

96006.6 Da

IEP (calculated)

5.170

GRAVY (calculated)

0.145

Length

882 amino acids

Sequence
(BLAST)

001: MRKLGTFVHC VVLVWCFCLI ELELVSPITE KEILLQFKGN ISTDPFNSLA SWDPNGTPCL DFSGVFCNSV GNVVKIVLWN TSLGGVLSPA LAELKSLRIL
101: TLFGNQFTGN IPAEYGGIDS LWKINFSSNA FSGSIPEFLG DLPNIRFLDL SRNVYSGEIP VSLFVNCNKT RFISLSHNNL SGSIPASIGN CQSLEGIDLS
201: FNGLSGSLPS QICDIPGLVY LSVRSNALSG LVQEQVSPCQ RLELLDLGSN EFSGLAPFGV LELVNLTYFN VSNNDFEGEI VNSGTCSQRL EVLDVSRNNF
301: FGEIPLSISK CNTLKYLDMA YNRINGSIPI ELADLKSLSV IRLGDNLLGG TIPAELGGIE WLAVLDLHNL TLFGEIPYEI SNCKLLLQLD LSGNLLVGEI
401: PQNLYNLSNL VYLDLHHNQL NGSIPSTIGN LSNLHFLDLS QNLLSGSIPV ALGDLQNLTH FNVSYNLLSG AIPSIESIKK FGPSAFFHNS GLCGDPLEVS
501: CTASGTTLAK GKPKLSVSAI VAIVAASIIL TGVCLITIIN MKARRRRRRE DETFVLESTP LASTDSNVII GKLVLFSKTL PSKYEDWEAG TKALLDKESL
601: IGGGTIGSVY RTSFEGGVSI AVKKLETLGQ IRNQDEFEHE VGRLGTLQHP NLVALQGYYW SSSMQLILSE FVPNGNLYDN LHGLSYPGTS TGAGNPELNW
701: PRRFQIAVGT ARALTYLHHD CKPPVLHLNV KSTNILLDTN YEAKLTDYGL SRFLPLLDNY GLTKFHNAVG YVAPELAQSL RLSDKCDVYS FGVILLELVT
801: GRKPVESPIA NEVVVLCEYV RGLIERGAAS DCFDRSLRGY AENELIQVMK LGLICTSEIS SRRPSMAEVV QVLESIRNGL GS

Best Arabidopsis Sequence Match ( AT1G12460.1 )
(BLAST)

001: MRKVHLFLVL VHFIYISTSR SDSISERDIL LQFKGSISDD PYNSLASWVS DGDLCNSFNG ITCNPQGFVD KIVLWNTSLA GTLAPGLSNL KFIRVLNLFG
101: NRFTGNLPLD YFKLQTLWTI NVSSNALSGP IPEFISELSS LRFLDLSKNG FTGEIPVSLF KFCDKTKFVS LAHNNIFGSI PASIVNCNNL VGFDFSYNNL
201: KGVLPPRICD IPVLEYISVR NNLLSGDVSE EIQKCQRLIL VDLGSNLFHG LAPFAVLTFK NITYFNVSWN RFGGEIGEIV DCSESLEFLD ASSNELTGRI
301: PTGVMGCKSL KLLDLESNKL NGSIPGSIGK MESLSVIRLG NNSIDGVIPR DIGSLEFLQV LNLHNLNLIG EVPEDISNCR VLLELDVSGN DLEGKISKKL
401: LNLTNIKILD LHRNRLNGSI PPELGNLSKV QFLDLSQNSL SGPIPSSLGS LNTLTHFNVS YNNLSGVIPP VPMIQAFGSS AFSNNPFLCG DPLVTPCNSR
501: GAAAKSRNSD ALSISVIIVI IAAAVILFGV CIVLALNLRA RKRRKDEEIL TVETTPLASS IDSSGVIIGK LVLFSKNLPS KYEDWEAGTK ALLDKENIIG
601: MGSIGSVYRA SFEGGVSIAV KKLETLGRIR NQEEFEQEIG RLGGLQHPNL SSFQGYYFSS TMQLILSEFV PNGSLYDNLH LRIFPGTSSS YGNTDLNWHR
701: RFQIALGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVMDSFGL TKKFHNAVGY IAPELAQQSL RASEKCDVYS YGVVLLELVT
801: GRKPVESPSE NQVLILRDYV RDLLETGSAS DCFDRRLREF EENELIQVMK LGLLCTSENP LKRPSMAEVV QVLESIRNGF GS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:UniProtKB/Swiss-Prot;Acc:C0LGE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.