Factsheet for Solyc09g015520.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01890.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT5G01890.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT5G01890.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT5G01890.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT5G01890.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT5G01890.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT5G01890.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT5G01890.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT5G01890.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT5G01890.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT5G01890.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT5G01890.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068892	Potato	plasma membrane	92.95	95.63
VIT_08s0058g01340.t01	Wine grape	plasma membrane	65.49	67.59
KRH00443	Soybean	cytosol, nucleus	63.32	65.7
KRH40729	Soybean	plasma membrane	64.77	64.63
KRH76129	Soybean	plasma membrane	63.73	63.47
KRH65414	Soybean	plasma membrane	62.59	62.27
Solyc06g048950.2.1	Tomato	plasma membrane	57.2	61.74
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	43.21	60.43
Solyc06g048620.2.1	Tomato	plasma membrane	60.0	59.63
GSMUA_Achr6P32490_001	Banana	plasma membrane	46.84	59.01
GSMUA_Achr9P04820_001	Banana	plasma membrane	47.67	58.82
CDY04822	Canola	plasma membrane	56.06	58.3
GSMUA_Achr5P29680_001	Banana	plasma membrane	44.87	57.81
AT5G01890.1	Thale cress	plasma membrane	57.93	57.81
TraesCS4D01G172000.1	Wheat	plasma membrane	55.23	54.78
HORVU4Hr1G050250.1	Barley	plasma membrane	55.03	54.57
TraesCS4B01G169900.1	Wheat	plasma membrane	55.13	54.51
TraesCS4A01G135200.1	Wheat	plasma membrane	54.92	54.47
Os03t0335500-01	Rice	plasma membrane	54.61	54.27
EER94903	Sorghum	plasma membrane	54.3	53.91
Os01t0821900-01	Rice	peroxisome, plasma membrane	43.21	53.81
Zm00001d029059_P001	Maize	plasma membrane	53.58	53.19
HORVU3Hr1G081050.3	Barley	plastid	45.28	52.09
Os05t0478300-01	Rice	plasma membrane, plastid, vacuole	41.76	51.21
TraesCS3D01G337800.1	Wheat	plasma membrane	49.74	50.63
EES03806	Sorghum	plasma membrane	49.74	50.63
TraesCS3B01G376200.1	Wheat	plasma membrane	49.53	50.53
TraesCS3A01G344300.1	Wheat	plasma membrane	45.6	50.46
Zm00001d043058_P001	Maize	plasma membrane	49.53	50.37
EES18394	Sorghum	plasma membrane, plastid	44.56	45.55
Zm00001d038481_P001	Maize	plasma membrane, plastid	44.35	43.9
Solyc09g098290.2.1	Tomato	plasma membrane	44.56	42.49
Solyc08g079740.2.1	Tomato	plasma membrane	34.3	37.53
Solyc08g061560.2.1	Tomato	plasma membrane	31.71	30.91
Solyc03g007050.2.1	Tomato	extracellular	31.19	30.87

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	UniProt:K4CS23	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516
PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF324
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc09g015520.2	EnsemblPlants:Solyc09g015520.2.1	TMHMM:TMhelix	UniParc:UPI000276BF0A	SEG:seg

Description

Leucine-rich repeat receptor-like protein kinase PXC2 [Source:Projected from Arabidopsis thaliana (AT5G01890) UniProtKB/Swiss-Prot;Acc:Q9LZV7]

Coordinates

chr9:+:9621116..9624602

Molecular Weight (calculated)

105010.0 Da

IEP (calculated)

5.481

GRAVY (calculated)

0.074

Length

965 amino acids

Sequence
(BLAST)

001: MLWHILTVLS LAPFLVYSLD PAFNDDVMGL IVFKAGLTDP KSKLASWTED DPTPCNWVGI NCYPQSNRVS EILLDNFSLS GHIGRSLLRL QFLKVLSLSH
101: NNFTGNINPI LSQIPSLRVI DLSHNTLSGS IPDEFLQQCT SLQSVSFANN NLTGQIPQSL TSCSTLQRVN FSSNHLSGSL PSALWSLTSL QSLDVSDNLL
201: EGEIPKAIEG LYSLRSINLH KNKFAGWLPE NIGNCVQLMS IDLSDNLLTG GLPQSMRRLG FCTNLELRSN LFNGEIPDWI AEMKSLKVLD LSANNLSGRI
301: PTSMGDLSLL KELNLSNNYF VGSLPRSLMK CSNLVILDIG NNFLTGNLPS WTFELGVERI SLSGNRFTGH INYPSISIGA SYRSLQVLDL SSNELSGEIP
401: AAIWNISGLQ VLNISRNFLS GAIPEAVGKL NATRILDLSH NQLNGSIPNE IGSAVSLLEL KLRENHLSGT IPADIANCSS LSSLDLSHNN LTGPIPPEIA
501: KLTILEVVDF SFNQFSGSLP KELTNLSHLA TFNVSHNHLK GELPVGGFFN TISPSSVVGN PSLCGSVLNH SCPAVHPKPL VLNPNSSDPN HASVTSLGHK
601: RIMLSISSLI AIGAAVFIAL GVVVVSILNL HVRSTMALSA ATFTLSGGDD FSHSHGTEAN LGKLVMFSGD ADFVVGTQAL LNKDNELGRG GFGAVYKTEL
701: GDGRSVAIKK LNITSLIKSQ EDFEREMKSL GSIRHENLVA LEGYYWTPSL QLLINEYVSG GSLYKLLHDG SSERSLSWQQ RFNIILDTAK GLAYLHQLNI
801: IHYNMKSTNV LIDDGSTSTK IGDFGLARLL PILDRYILSS KIQSALGYMA PEFACQTVKI TEKCDVYGFG IMILEVVTGK RPVEYMEDDV IVLCDMVRGA
901: LEEGRIEECI DGRLQGNFPV EEAIPVVKLG LICASQVPSN RPDMEEVIKI LELIRCPSES QEEID

Best Arabidopsis Sequence Match ( AT3G56370.1 )
(BLAST)

001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS

Arabidopsis Description

IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.