CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 5
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99087
EES01631
EES09201
EES14272
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56370.1	EER99087	AT5G12900.1	15618632
AT3G56370.1	EES14272	AT5G12900.1	15618632
AT5G01890.1	EES01631	AT2G41090.1	17360592
AT5G01890.1	EES09201	AT2G41090.1	17360592
AT5G01890.1	EES16322	AT2G41090.1	17360592
AT5G01890.1	OQU78227	AT2G41090.1	17360592
AT5G01890.1	KXG37587	AT4G14640.1	17360592
AT5G01890.1	KXG37588	AT4G14640.1	17360592
AT5G01890.1	EES01631	AT5G21274.1	17360592
AT5G01890.1	EES09201	AT5G21274.1	17360592
AT5G01890.1	EES16322	AT5G21274.1	17360592
AT5G01890.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038481_P001	Maize	plasma membrane, plastid	90.68	87.79
Os05t0478300-01	Rice	plasma membrane, plastid, vacuole	67.48	80.94
EES03806	Sorghum	plasma membrane	72.46	72.15
GSMUA_Achr9P04820_001	Banana	plasma membrane	46.93	56.65
EER94903	Sorghum	plasma membrane	57.73	56.07
GSMUA_Achr6P32490_001	Banana	plasma membrane	44.7	55.09
PGSC0003DMT400042952	Potato	plasma membrane	48.83	51.57
Solyc06g048950.2.1	Tomato	plasma membrane	48.73	51.45
CDY27220	Canola	plasma membrane	50.64	51.07
VIT_08s0058g01340.t01	Wine grape	plasma membrane	50.32	50.8
CDX72142	Canola	plasma membrane	50.21	50.64
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	36.76	50.29
Bra007241.1-P	Field mustard	plasma membrane	50.95	50.16
KRH53723	Soybean	plasma membrane	51.38	49.59
AT3G56370.1	Thale cress	plasma membrane	50.53	49.48
KRH64211	Soybean	plasma membrane	51.17	49.39
PGSC0003DMT400070944	Potato	plasma membrane	50.11	48.81
Solyc06g048620.2.1	Tomato	plasma membrane	50.11	48.71
KRH00443	Soybean	cytosol, nucleus	47.99	48.71
CDY04822	Canola	plasma membrane	46.19	46.98
KRH40729	Soybean	plasma membrane	47.99	46.85
VIT_13s0067g03050.t01	Wine grape	plasma membrane	51.48	46.73
KRH76129	Soybean	plasma membrane	47.56	46.34
KRH65414	Soybean	plasma membrane	47.35	46.08
AT5G01890.1	Thale cress	plasma membrane	46.82	45.71
PGSC0003DMT400068892	Potato	plasma membrane	44.92	45.2
Solyc09g015520.2.1	Tomato	plasma membrane	45.55	44.56
EER95591	Sorghum	plasma membrane	33.47	35.35
KXG34152	Sorghum	plasma membrane	41.0	34.58
EER89390	Sorghum	plasma membrane	29.03	27.9
KXG31210	Sorghum	plasma membrane	29.34	27.56
EER87774	Sorghum	plasma membrane	28.18	27.2
OQU91738	Sorghum	cytosol	9.32	26.51

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:8077005	UniProt:C5YZS9
EnsemblPlants:EES18394	ProteinID:EES18394	ProteinID:EES18394.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF230	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369	EnsemblPlantsGene:SORBI_3009G174100	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A889DC	RefSeq:XP_002439964.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:52948086..52951768

Molecular Weight (calculated)

99605.9 Da

IEP (calculated)

5.429

GRAVY (calculated)

0.170

Length

944 amino acids

Sequence
(BLAST)

001: MISSPTTSSS SSSAAAATAA MATPSRLLLP VLVLLAASAG AAAAATVSDD VLALVVLKSG LSDPSGRLAP WSEDADRACA WPGVSCDPRT GRVAALDLPA
101: ASLAGRLPRS ALLRLDALVS LALPGNRLSG ALPDALPPRL RALDLSGNAI SGGIPASLAS CDSLVSLNLS RNRLTGPVPD GIWSLPSLRS VDLSGNLLSG
201: TVPGGFPRSS SLRVVDLSRN LLEGEIPADV GEAGLLKSLD LGHNSFTGGL PESLRGLSAL SFLGAGGNAL SGELQAWIGE MAALERLDLS GNHFVGGIPD
301: AISGCKNLVE VDLSRNALTG ELPWWVFGLA LQRVSVAGNA LSGWVKVPGD AAATLEALDL SANAFTGAIP PEITILARLQ YLNLSSNSMS GQLPASIGLM
401: LVLEVLDVSA NKFEGVVPPE IGGAMALRQL LMGRNSLTGG IPVQIGTCKS LIALDLSHNK LAGPIPMSMG NLASLQTVDL SDNLLNGTLP MELSKLDSLR
501: VFNVSHNSLS GSLPNSRFFD SIPYSFISDN AGLCSSQKNS NCNGVMPKPI VFNPNSSSDP WSDVAPSSSS NRHQKKMILS ISTLIAIVGG AVILIGVATI
601: TVLNCRARAT VSRSALPAAA LSDDYHSQSA ESPENEAKSG KLVMFGRGSS DFSADGHALL NKDCELGRGG FGTVYRAVLR DGQPVAIKKL TVSSMVKSED
701: DFKQHVKLLG KVRHHNIVTL KGFYWTSSLQ LLIYEFMPAG SLHQHLHECS YESSLSWMER FDIIIGVARA LVHLHRYGII HYNLKSSNVL LDSNGEPRVG
801: DYGLVNLLPV LDQYVLSSKI QSALGYMAPE FTCRTVKVTE KCDVYSFGVL VLEILTGRRP VEYLEDDVVV LSDLVRGVLD DDRLEDCMDP RLSGEFSMEE
901: ATLIIKLGLV CASQVPSQRP DMAEVVSMLE MVRSPQGTPE DDLV

Best Arabidopsis Sequence Match ( AT3G56370.1 )
(BLAST)

001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS

Arabidopsis Description

IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.