CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01890.1	KRG89812	AT2G41090.1	17360592
AT5G01890.1	KRG94975	AT2G41090.1	17360592
AT5G01890.1	KRH18664	AT2G41090.1	17360592
AT5G01890.1	KRH31638	AT4G14640.1	17360592
AT5G01890.1	KRH69070	AT4G14640.1	17360592
AT5G01890.1	KRG89812	AT5G21274.1	17360592
AT5G01890.1	KRG94975	AT5G21274.1	17360592
AT5G01890.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76129	Soybean	plasma membrane	95.15	95.25
KRH00443	Soybean	cytosol, nucleus	76.91	80.22
KRH40729	Soybean	plasma membrane	78.35	78.59
VIT_08s0058g01340.t01	Wine grape	plasma membrane	65.36	67.81
PGSC0003DMT400068892	Potato	plasma membrane	61.13	63.22
Solyc09g015520.2.1	Tomato	plasma membrane	62.27	62.59
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	42.78	60.14
KRH64211	Soybean	plasma membrane	60.52	60.02
KRH53723	Soybean	plasma membrane	60.21	59.71
GSMUA_Achr9P04820_001	Banana	plasma membrane	47.42	58.82
CDY04822	Canola	plasma membrane	56.08	58.62
AT5G01890.1	Thale cress	plasma membrane	57.53	57.7
GSMUA_Achr6P32490_001	Banana	plasma membrane	45.05	57.05
TraesCS4D01G172000.1	Wheat	plasma membrane	56.39	56.22
TraesCS4A01G135200.1	Wheat	plasma membrane	56.39	56.22
HORVU4Hr1G050250.1	Barley	plasma membrane	56.39	56.22
TraesCS4B01G169900.1	Wheat	plasma membrane	56.29	55.94
GSMUA_Achr5P29680_001	Banana	plasma membrane	42.78	55.41
Os03t0335500-01	Rice	plasma membrane	54.95	54.89
EER94903	Sorghum	plasma membrane	54.95	54.84
Zm00001d029059_P001	Maize	plasma membrane	54.85	54.73
Os01t0821900-01	Rice	peroxisome, plasma membrane	42.06	52.65
Os05t0478300-01	Rice	plasma membrane, plastid, vacuole	41.86	51.59
EES03806	Sorghum	plasma membrane	50.21	51.37
TraesCS3D01G337800.1	Wheat	plasma membrane	49.69	50.84
TraesCS3B01G376200.1	Wheat	plasma membrane	49.48	50.74
HORVU3Hr1G081050.3	Barley	plastid	43.81	50.66
TraesCS3A01G344300.1	Wheat	plasma membrane	45.36	50.46
Zm00001d043058_P001	Maize	plasma membrane	48.97	50.05
EES18394	Sorghum	plasma membrane, plastid	46.08	47.35
Zm00001d038481_P001	Maize	plasma membrane, plastid	46.8	46.56
KRH01549	Soybean	nucleus, plasma membrane	43.92	42.3
KRH70560	Soybean	plasma membrane	43.81	42.2
KRH27994	Soybean	plasma membrane	32.58	35.75
KRH77441	Soybean	plasma membrane	32.06	35.1
KRH15603	Soybean	plasma membrane	31.24	30.92
KRH61582	Soybean	plasma membrane	31.34	30.86
KRH52253	Soybean	plasma membrane	31.13	30.69
KRH05414	Soybean	plasma membrane	30.93	30.61
KRH35424	Soybean	plasma membrane	30.72	30.13
KRG91394	Soybean	plasma membrane	30.82	30.11
KRH38704	Soybean	plasma membrane	30.0	29.57
KRH09211	Soybean	plasma membrane	30.21	29.04

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100812508	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EMBL:ACUP02001344
EnsemblPlantsGene:GLYMA_03G034200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	UniProt:I1JKW5	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRH65414
ProteinID:KRH65414	ProteinID:KRH65414.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF324	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI0002339A9E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:3989072..3993561

Molecular Weight (calculated)

105900.0 Da

IEP (calculated)

5.645

GRAVY (calculated)

0.106

Length

970 amino acids

Sequence
(BLAST)

001: MKQVQFTLLL SVSLVILFGP ILVISVDLSF NDDVLGLIMF KAGLQDPKGK LSTWNEDDYS PCHWVGVKCD PANNRVSSLV LDGFSLSGHI DRGLLRLQFL
101: QILSLSRNNF TGTIAPDLLT IGDLLVVDLS ENNLSGPIPD GIFQQCWSLR VVSFANNNLT GKVPDSLSSC YSLAIVNFSS NQLHGELPSG MWFLRGLQSI
201: DLSNNFLEGE IPEGIQNLID LRELRLGSNH FTGRVPEHIG DCLLLKLVDF SGNSLSGRLP ESMQKLTSCT FLSLQGNSFT GGIPHWIGEM KSLETLDFSA
301: NRFSGWIPNS IGNLDLLSRL NLSRNQITGN LPELMVNCIK LLTLDISHNH LAGHLPSWIF RMGLQSVSLS GNSFSESNYP SLTSIPVSFH GLQVLDLSSN
401: AFFGQLPSGV GGLSSLQVLN LSTNNISGSI PVSIGELKSL CILDLSNNKL NGSIPSEVEG AISLSEMRLQ KNFLGGRIPT QIEKCSELTF LNLSHNKLIG
501: SIPSAIANLT NLQHADFSWN ELSGNLPKEL TNLSNLFSFN VSYNHLLGEL PVGGFFNIIS PSSVSGNPLL CGSVVNHSCP SVHPKPIVLN PNSSYSNSGS
601: SLQNHQHRMM LSISVIIAIG AAIFIVIGVV VVTVLNIHAR SSMIPSAAPF VFSGGEDYSG SPRNDPNYGK LVMFSGDAEF ADGAHNLLNK DSEIGRGGFG
701: VVYCTVLRDG HCVAIKKLTV STLTKSQEDF DREVKMLGEI KHQNLVALEG FYWTPSLQLL IYEYLARGSL QKLLHDDDDS SKNVLSWRQR FKIILGMAKG
801: LAYLHQMELI HYNLKSTNVF IDCSDEPKIG DFGLVRLLPM LDHCVLSSKI QSALGYTAPE FACRTVKITE KCDIYSFGIL ILEVVTGKRP VEYTEDDVVV
901: LCDKVRSALD DGKVEQCVDE KLKGNFAADE AIPVIKLGLV CASQVPSNRP DMAEVINILE LIQCPSEELQ

Best Arabidopsis Sequence Match ( AT1G12460.1 )
(BLAST)

001: MRKVHLFLVL VHFIYISTSR SDSISERDIL LQFKGSISDD PYNSLASWVS DGDLCNSFNG ITCNPQGFVD KIVLWNTSLA GTLAPGLSNL KFIRVLNLFG
101: NRFTGNLPLD YFKLQTLWTI NVSSNALSGP IPEFISELSS LRFLDLSKNG FTGEIPVSLF KFCDKTKFVS LAHNNIFGSI PASIVNCNNL VGFDFSYNNL
201: KGVLPPRICD IPVLEYISVR NNLLSGDVSE EIQKCQRLIL VDLGSNLFHG LAPFAVLTFK NITYFNVSWN RFGGEIGEIV DCSESLEFLD ASSNELTGRI
301: PTGVMGCKSL KLLDLESNKL NGSIPGSIGK MESLSVIRLG NNSIDGVIPR DIGSLEFLQV LNLHNLNLIG EVPEDISNCR VLLELDVSGN DLEGKISKKL
401: LNLTNIKILD LHRNRLNGSI PPELGNLSKV QFLDLSQNSL SGPIPSSLGS LNTLTHFNVS YNNLSGVIPP VPMIQAFGSS AFSNNPFLCG DPLVTPCNSR
501: GAAAKSRNSD ALSISVIIVI IAAAVILFGV CIVLALNLRA RKRRKDEEIL TVETTPLASS IDSSGVIIGK LVLFSKNLPS KYEDWEAGTK ALLDKENIIG
601: MGSIGSVYRA SFEGGVSIAV KKLETLGRIR NQEEFEQEIG RLGGLQHPNL SSFQGYYFSS TMQLILSEFV PNGSLYDNLH LRIFPGTSSS YGNTDLNWHR
701: RFQIALGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVMDSFGL TKKFHNAVGY IAPELAQQSL RASEKCDVYS YGVVLLELVT
801: GRKPVESPSE NQVLILRDYV RDLLETGSAS DCFDRRLREF EENELIQVMK LGLLCTSENP LKRPSMAEVV QVLESIRNGF GS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:UniProtKB/Swiss-Prot;Acc:C0LGE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.