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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G56370.1 TraesCS5A01G265200.2 AT5G12900.1 15618632
AT3G56370.1 TraesCS5B01G264800.2 AT5G12900.1 15618632
AT3G56370.1 TraesCS5D01G273100.1 AT5G12900.1 15618632
AT3G56370.1 TraesCS7A01G245900.1 AT5G12900.1 15618632
AT3G56370.1 TraesCS7B01G145600.1 AT5G12900.1 15618632
AT3G56370.1 TraesCS7D01G244400.1 AT5G12900.1 15618632
AT5G01890.1 TraesCS1A01G308700.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS1A01G308800.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS1B01G319300.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS1D01G308000.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS2B01G113800.2 AT2G41090.1 17360592
AT5G01890.1 TraesCS3A01G184500.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS3A01G191900.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS3A01G335000.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS3B01G219900.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS3B01G365900.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS3D01G188600.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS3D01G194500.2 AT2G41090.1 17360592
AT5G01890.1 TraesCS3D01G328300.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS4B01G131100.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS4D01G126100.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5A01G057100.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5A01G057200.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5A01G139700.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5B01G059900.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5B01G137100.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5D01G068000.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5D01G068100.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5D01G153400.1 AT2G41090.1 17360592
AT5G01890.1 TraesCS5A01G382800.2 AT4G14640.1 17360592
AT5G01890.1 TraesCS1A01G308700.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS1A01G308800.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS1B01G319300.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS1D01G308000.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS2B01G113800.2 AT5G21274.1 17360592
AT5G01890.1 TraesCS3A01G184500.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS3A01G191900.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS3A01G335000.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS3B01G219900.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS3B01G365900.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS3D01G188600.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS3D01G194500.2 AT5G21274.1 17360592
AT5G01890.1 TraesCS3D01G328300.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS4B01G131100.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS4D01G126100.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS5A01G057100.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS5A01G057200.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS5A01G139700.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS5B01G059900.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS5B01G137100.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS5D01G068000.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS5D01G068100.1 AT5G21274.1 17360592
AT5G01890.1 TraesCS5D01G153400.1 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G172000.1 Wheat plasma membrane 98.05 98.36
TraesCS4A01G135200.1 Wheat plasma membrane 97.44 97.74
HORVU4Hr1G050250.1 Barley plasma membrane 96.82 97.12
Os03t0335500-01 Rice plasma membrane 88.01 88.47
EER94903 Sorghum plasma membrane 84.12 84.47
Zm00001d029059_P001 Maize plasma membrane 82.89 83.23
GSMUA_Achr9P04820_001 Banana plasma membrane 53.48 66.75
GSMUA_Achr6P32490_001 Banana plasma membrane 51.33 65.4
PGSC0003DMT400042952 Potato plasma membrane 57.27 62.53
Solyc06g048950.2.1 Tomato plasma membrane 56.35 61.52
VIT_08s0058g01340.t01 Wine grape plasma membrane 58.81 61.39
PGSC0003DMT400070944 Potato plasma membrane 60.04 60.47
CDY27220 Canola plasma membrane 57.99 60.47
Solyc06g048620.2.1 Tomato plasma membrane 60.04 60.35
Bra007241.1-P Field mustard plasma membrane 59.22 60.27
CDX72142 Canola plasma membrane 57.79 60.26
KRH64211 Soybean plasma membrane 59.63 59.51
KRH53723 Soybean plasma membrane 59.53 59.41
AT3G56370.1 Thale cress plasma membrane 58.61 59.34
TraesCS3B01G376200.1 Wheat plasma membrane 57.38 59.2
KRH00443 Soybean cytosol, nucleus 56.35 59.14
VIT_13s0067g03050.t01 Wine grape plasma membrane 61.78 57.98
Bra028916.1-P Field mustard mitochondrion, peroxisome, plasma membrane, plastid 40.98 57.97
KRH40729 Soybean plasma membrane 57.17 57.7
KRH76129 Soybean plasma membrane 56.45 56.86
PGSC0003DMT400068892 Potato plasma membrane 54.3 56.5
KRH65414 Soybean plasma membrane 55.94 56.29
CDY04822 Canola plasma membrane 52.87 55.6
Solyc09g015520.2.1 Tomato plasma membrane 54.51 55.13
AT5G01890.1 Thale cress plasma membrane 52.36 52.84
TraesCS4B01G320600.1 Wheat plasma membrane 34.43 37.75
TraesCS7B01G069800.2 Wheat plasma membrane 32.17 32.17
TraesCS6B01G366900.1 Wheat plasma membrane 30.94 30.26
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.7Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00560PFAM:PF07714PFAM:PF08263
PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107PFscan:PS50011PANTHER:PTHR27000PANTHER:PTHR27000:SF244
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00369SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS4B01G169900EnsemblPlants:TraesCS4B01G169900.1TIGR:cd14066
SEG:seg:::::
Description
No Description!
Coordinates
chr4B:-:371378199..371382287
Molecular Weight (calculated)
103388.0 Da
IEP (calculated)
5.760
GRAVY (calculated)
0.102
Length
976 amino acids
Sequence
(BLAST)
001: MRSLVLLLLV HLVFLAEAKG GGRAGLAAAL NDDVLGLIVF KADVVDPEGR LATWSEDDER ACAWAGITCD PRTGRVSGLN LAGFGLSGKL GRGLLRLESL
101: QSLSLSANNF SGDIPPDLAR LPDLQSLDLS SNAFSGAIPE GFFGKCHALR DVSLANNAFT GDTPDVGACG TLASLNLSSN RLAGMLPSGI WSLNALRTLD
201: LSGNVITGEL PVGISKMFNL RALNLRRNRL TGSLPDDIGD CPLLRSLDLS SNSLSGNLPE SLRRLSTCTD LDLSSNELTG NVPTWVGEMV SLETLDLSGN
301: KFSGEIPGSI GGLMSLRELR LSGNGFTGGL PESIGGCTSL VHVDVSWNSL TGSLPTWVFA SGVRWVSVSY NTFSGEVMVP VNGSSVIQGV DLSSNSFSGR
401: IPSELSQLLT LQSLNMSWNS LSGSVPASIV EMKSLELLDL SANRLNGSIP STIGGRSFKV LSLAKNSLTG EIPPQIGDCS ALTSLDLSHN GLTGAIPATI
501: ANLTNLQTAD LSRNKLMGGL PKQLSNLAHL VRFNISHNQL SGDLPPGSFF DTISVSSVSD NPGLCGAKLN SSCPGVLPKP IVLNPDSSSN PLAQKEPVPG
601: GLHHKKTILS ISALVAIGAA VLIAVGIITI TVLNLQVRAP GSHSAAAAAA AAALELSDGY LSQSPTTDVN AGKLVMFGGG NPEFSASTHA LLNKDCELGR
701: GGFGTVYKTT LRDGQPVAIK KLTVSSLVKS QDEFEREVKM LGKLRHRNLV ALKGYYWTPS LQLLIYEFVS GGNLHKQLHE SSNANYLSWK ERFDIVLGMA
801: RSLAHLHRHD IIHYNLKSSN IMLDGSGEAK VGDYGLAKLL PVLDRYVLSS KVQSALGYIA PEFTCRTVKI TEKCDVYGFG VLVLEVMTGR APVEYMEDDV
901: IVLCDVVRAA LDEGKVEECV DEKLCGKFPL EEAVPIMKLG LVCTSQVPSN RPDMSEVVNI LELIRCPQDS PEAELG
Best Arabidopsis Sequence Match ( AT3G56370.1 )
(BLAST)
001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS
Arabidopsis Description
IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.