Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 9
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_06s0004g01680.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G56370.1 | VIT_06s0004g01680.t01 | AT5G12900.1 | 15618632 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400042952 | Potato | plasma membrane | 64.42 | 74.94 |
| Solyc06g048950.2.1 | Tomato | plasma membrane | 63.94 | 74.38 |
| KRH64211 | Soybean | plasma membrane | 69.52 | 73.93 |
| KRH53723 | Soybean | plasma membrane | 69.13 | 73.52 |
| PGSC0003DMT400070944 | Potato | plasma membrane | 67.69 | 72.65 |
| Solyc06g048620.2.1 | Tomato | plasma membrane | 67.6 | 72.4 |
| VIT_08s0058g01340.t01 | Wine grape | plasma membrane | 64.81 | 72.09 |
| CDX72142 | Canola | plasma membrane | 62.6 | 69.55 |
| CDY27220 | Canola | plasma membrane | 62.31 | 69.23 |
| AT3G56370.1 | Thale cress | plasma membrane | 64.13 | 69.19 |
| Bra007241.1-P | Field mustard | plasma membrane | 63.65 | 69.03 |
| GSMUA_Achr9P04820_001 | Banana | plasma membrane | 50.19 | 66.75 |
| GSMUA_Achr6P32490_001 | Banana | plasma membrane | 48.27 | 65.54 |
| GSMUA_Achr5P29680_001 | Banana | plasma membrane | 47.12 | 65.42 |
| EER94903 | Sorghum | plasma membrane | 58.85 | 62.96 |
| TraesCS4D01G172000.1 | Wheat | plasma membrane | 58.37 | 62.38 |
| HORVU4Hr1G050250.1 | Barley | plasma membrane | 58.27 | 62.28 |
| Os03t0335500-01 | Rice | plasma membrane | 57.98 | 62.1 |
| TraesCS4A01G135200.1 | Wheat | plasma membrane | 57.98 | 61.97 |
| Zm00001d029059_P001 | Maize | plasma membrane | 57.79 | 61.83 |
| TraesCS4B01G169900.1 | Wheat | plasma membrane | 57.98 | 61.78 |
| Os01t0821900-01 | Rice | peroxisome, plasma membrane | 43.85 | 58.84 |
| TraesCS3D01G337800.1 | Wheat | plasma membrane | 51.44 | 56.43 |
| HORVU3Hr1G081050.3 | Barley | plastid | 45.48 | 56.38 |
| EES03806 | Sorghum | plasma membrane | 51.35 | 56.33 |
| Os05t0478300-01 | Rice | plasma membrane, plastid, vacuole | 42.6 | 56.29 |
| TraesCS3B01G376200.1 | Wheat | plasma membrane | 51.15 | 56.24 |
| TraesCS3A01G344300.1 | Wheat | plasma membrane | 46.83 | 55.85 |
| Zm00001d043058_P001 | Maize | plasma membrane | 50.96 | 55.85 |
| EES18394 | Sorghum | plasma membrane, plastid | 46.73 | 51.48 |
| Zm00001d038481_P001 | Maize | plasma membrane, plastid | 45.96 | 49.03 |
| VIT_05s0062g01070.t01 | Wine grape | nucleus | 43.37 | 45.74 |
| VIT_00s1764g00020.t01 | Wine grape | cytosol, peroxisome | 19.9 | 42.86 |
| VIT_04s0008g01970.t01 | Wine grape | plasma membrane | 28.94 | 30.53 |
| VIT_16s0022g02030.t01 | Wine grape | cytosol, plasma membrane, vacuole | 27.6 | 30.24 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100257029 | wikigene:100257029 | MapMan:18.4.1.7 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 |
| EMBL:AM453936 | ProteinID:CAN76686 | ProteinID:CAN76686.1 | ProteinID:CCB49784 | ProteinID:CCB49784.1 | UniProt:F6HC72 |
| EMBL:FN595514 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | EntrezGene:LOC100257029 |
| wikigene:LOC100257029 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF07714 |
| PFAM:PF08263 | PFAM:PF13516 | PFAM:PF13855 | PRINTS:PR00019 | ScanProsite:PS00107 | PFscan:PS50011 |
| PANTHER:PTHR27000 | PANTHER:PTHR27000:SF244 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00369 | SUPFAM:SSF52047 |
| SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000210A3D8 |
| ArrayExpress:VIT_13s0067g03050 | EnsemblPlantsGene:VIT_13s0067g03050 | EnsemblPlants:VIT_13s0067g03050.t01 | unigene:Vvi.8428 | RefSeq:XP_002275275 | RefSeq:XP_002275275.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr13:-:1641324..1645352
Molecular Weight (calculated)
112015.0 Da
IEP (calculated)
7.259
GRAVY (calculated)
0.093
Length
1040 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAYLLGVLLA LLVVAPSCVK SLNPSLNDDV LGLIVFKADI QDPNSKLASW NEDDDSPCNW VGVKCNPRSN RVTDLVLDGF SLSGKIGRGL LQLQFLRKLS
0101: LAKNNITGSI GPNLARLQNL RFIDLSENSL SGTIPDDFFK QCGSLHAISL AKNKFSGKIP ESVGSCSTLA AIDFSSNQFS GPLPSGIWSL NGLRSLDLSD
0201: NLLEGDIPKG IDSLYNLRAI NLSKNRFSGP LPDGIGGCLL LRLIDFSENS LSGSLPGTMQ KLTLCNYMNL HGNSFEGEVP EWIGEMKSLE TLDLSANKFS
0301: GRVPTSIGNL KSLKVLNFSV NVFSGSLPES MINCEQLLVL DVSQNSLLGD LPAWIFKLGL QKVLLSKNSL SGNMDSPFSS SVEKSRQGLQ VLDLSYNELS
0401: GDFTSSIGVF RSLQFLNISR NSLVGAIPAS IGDLKALDVL DLSENQLNGS IPLEIGGAFS LKDLRLKNNF LAGKIPVSLE NCSSLTTLIL SHNNLSGPIP
0501: MGISKLSNLE NVDLSLNKLT GSLPKQLANL PHLISFNISH NQLQGELPAG GFFNTISPSS VSGNPSLCGS AANKSCPAVL PKPIVLNPNS SSDTTAGAFP
0601: RSLAHKKIIL SISALIAIGA AAVIVIGVIA ITVLNLRVRS SASRSAAALA LSGGDDYSHS PTTDANSGKL VMFSGDPDFS MGAHALLNKD CELGRGGFGA
0701: VYRTVLRDGH PVAIKKLTVS SLVKSQEDFE REVKKLGKIR HQNLVALEGY YWTPSLQLLI YEFISGGSLY KHLHEGAGGN FTWNERFNII LGTAKSLAHL
0801: HQMSIIHYNL KSSNVLIDPS GEPKVADFGL ARLLPMLDRY VLSSKIQSAL GYMAPEFACR TVKITEKCDV YGFGVLVLEV VTGKRPVEYM EDDVVVLCDM
0901: VRGALEEGKV EECVDGRLQG KFPAEEAIPV MKLGLICTSQ VPSNRPDMAE VVNILELIRC PSEGQEDLSA PIGVESICSL TLYIFFQQKR QCNPRIKIPV
1001: LLVFFPSDGR AELGSTLLIK NGCPIYQKQL SLMIQKLKAC
0101: LAKNNITGSI GPNLARLQNL RFIDLSENSL SGTIPDDFFK QCGSLHAISL AKNKFSGKIP ESVGSCSTLA AIDFSSNQFS GPLPSGIWSL NGLRSLDLSD
0201: NLLEGDIPKG IDSLYNLRAI NLSKNRFSGP LPDGIGGCLL LRLIDFSENS LSGSLPGTMQ KLTLCNYMNL HGNSFEGEVP EWIGEMKSLE TLDLSANKFS
0301: GRVPTSIGNL KSLKVLNFSV NVFSGSLPES MINCEQLLVL DVSQNSLLGD LPAWIFKLGL QKVLLSKNSL SGNMDSPFSS SVEKSRQGLQ VLDLSYNELS
0401: GDFTSSIGVF RSLQFLNISR NSLVGAIPAS IGDLKALDVL DLSENQLNGS IPLEIGGAFS LKDLRLKNNF LAGKIPVSLE NCSSLTTLIL SHNNLSGPIP
0501: MGISKLSNLE NVDLSLNKLT GSLPKQLANL PHLISFNISH NQLQGELPAG GFFNTISPSS VSGNPSLCGS AANKSCPAVL PKPIVLNPNS SSDTTAGAFP
0601: RSLAHKKIIL SISALIAIGA AAVIVIGVIA ITVLNLRVRS SASRSAAALA LSGGDDYSHS PTTDANSGKL VMFSGDPDFS MGAHALLNKD CELGRGGFGA
0701: VYRTVLRDGH PVAIKKLTVS SLVKSQEDFE REVKKLGKIR HQNLVALEGY YWTPSLQLLI YEFISGGSLY KHLHEGAGGN FTWNERFNII LGTAKSLAHL
0801: HQMSIIHYNL KSSNVLIDPS GEPKVADFGL ARLLPMLDRY VLSSKIQSAL GYMAPEFACR TVKITEKCDV YGFGVLVLEV VTGKRPVEYM EDDVVVLCDM
0901: VRGALEEGKV EECVDGRLQG KFPAEEAIPV MKLGLICTSQ VPSNRPDMAE VVNILELIRC PSEGQEDLSA PIGVESICSL TLYIFFQQKR QCNPRIKIPV
1001: LLVFFPSDGR AELGSTLLIK NGCPIYQKQL SLMIQKLKAC
001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS
Arabidopsis Description
IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.