Factsheet for HORVU3Hr1G081050.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU5Hr1G073290.4
HORVU5Hr1G073320.1
HORVU7Hr1G050500.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56370.1	HORVU5Hr1G073290.4	AT5G12900.1	15618632
AT3G56370.1	HORVU5Hr1G073320.1	AT5G12900.1	15618632
AT3G56370.1	HORVU7Hr1G050500.2	AT5G12900.1	15618632
AT5G01890.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT5G01890.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT5G01890.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT5G01890.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT5G01890.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT5G01890.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT5G01890.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT5G01890.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT5G01890.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT5G01890.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT5G01890.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT5G01890.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT5G01890.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT5G01890.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT5G01890.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT5G01890.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0821900-01	Rice	peroxisome, plasma membrane	79.74	86.32
TraesCS3B01G376200.1	Wheat	plasma membrane	94.52	83.83
TraesCS3D01G337800.1	Wheat	plasma membrane	94.52	83.65
TraesCS3A01G344300.1	Wheat	plasma membrane	84.86	81.65
EES03806	Sorghum	plasma membrane	83.55	73.95
Zm00001d043058_P001	Maize	plasma membrane	81.53	72.08
GSMUA_Achr9P04820_001	Banana	plasma membrane	50.06	53.71
GSMUA_Achr6P32490_001	Banana	plasma membrane	48.39	53.0
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	42.31	51.45
HORVU4Hr1G050250.1	Barley	plasma membrane	59.0	50.87
PGSC0003DMT400042952	Potato	plasma membrane	53.75	50.45
Solyc06g048950.2.1	Tomato	plasma membrane	53.64	50.34
CDY27220	Canola	plasma membrane	55.18	49.47
CDX72142	Canola	plasma membrane	55.07	49.36
VIT_08s0058g01340.t01	Wine grape	plasma membrane	54.71	49.09
KRH00443	Soybean	cytosol, nucleus	53.87	48.6
AT3G56370.1	Thale cress	plasma membrane	55.78	48.55
PGSC0003DMT400070944	Potato	plasma membrane	55.66	48.19
Bra007241.1-P	Field mustard	plasma membrane	55.07	48.18
Solyc06g048620.2.1	Tomato	plasma membrane	55.42	47.89
KRH64211	Soybean	plasma membrane	54.95	47.14
KRH53723	Soybean	plasma membrane	54.83	47.03
KRH40729	Soybean	plasma membrane	53.4	46.33
PGSC0003DMT400068892	Potato	plasma membrane	51.01	45.63
VIT_13s0067g03050.t01	Wine grape	plasma membrane	56.38	45.48
Solyc09g015520.2.1	Tomato	plasma membrane	52.09	45.28
CDY04822	Canola	plasma membrane	49.34	44.61
KRH76129	Soybean	plasma membrane	51.49	44.58
HORVU1Hr1G051560.1	Barley	cytosol	2.15	43.9
KRH65414	Soybean	plasma membrane	50.66	43.81
AT5G01890.1	Thale cress	plasma membrane	48.87	42.4
HORVU3Hr1G109760.1	Barley	plasma membrane	42.67	34.03
HORVU4Hr1G083020.3	Barley	plasma membrane	33.13	30.85
HORVU4Hr1G003680.1	Barley	plasma membrane	21.81	27.56
HORVU6Hr1G081290.10	Barley	plastid	29.32	24.97
HORVU3Hr1G116330.2	Barley	cytosol, mitochondrion	19.79	24.78
HORVU7Hr1G012920.16	Barley	mitochondrion	28.49	24.34
HORVU7Hr1G034430.6	Barley	plasma membrane, plastid	30.15	22.45

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A287LWL6	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G081050
EnsemblPlants:HORVU3Hr1G081050.3	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF07714	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF162	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI000B46C7BC
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:592563213..592566323

Molecular Weight (calculated)

88904.7 Da

IEP (calculated)

6.747

GRAVY (calculated)

0.038

Length

839 amino acids

Sequence
(BLAST)

001: PAASRARSSA STRSSPSPSP ATTSPAPCSP ASSPPSPRLR SLDLSSNDLS GYIPPAVASC SSLLSLNLSS NRLAGPIPDG IWSLPSLRSL DLSGNSLSGS
101: VPGGFPRSSS LRALDLSRNL FAGEIPADVG EAALLKSLDL GRNFFTGGLP DSLRRLTALR FLGAGSNALA GEVPAWIGEM WSLERLDLSG NCFAGIIPED
201: IAKCKNLLEA DLSRNALTGQ LPWWVFGLPL QRVSVAGNKL GGWVKVPGDA ALALHVLDLS SNAFSGGIPE QITAFTGLQF LNLSSNSISG QLPAGIGAMR
301: LLEALDVSAN TLTGSVPPEI GGAVALRVLR LGNNSLTGGI PAQIGSCSSL VALDLSHNDI TGPIPSTLGN LTSLQAVDLS QNKLNGTLPV ELSNLPSLHV
401: FDVSHNLLSG NLPNSRFFDN IPDYFLADNS GLCSSRKNNS CGAVMPKPIV LNPNSSSNPL SQSSPSSPSS KHHKKIILSV STLIAIAGGA AIAIGVITVT
501: VLNRRVRAAA SHPKPAVALS DDYLSQSPEN DASSGKLVMF GKGSPEFSTG GHALLNKDCE LGRGGFGAVY KTVLRDGQPV AIKKLTVSSL VKSKDDFERQ
601: VKVLSKMRHH NIVTLRGFYW TSSLQLLIYD YLPGGNLHKH LHDCTEENSL SWMERFDIII GVARGLMHLH QHGVVHYNLK SSNVLLDSNG EPRVGDYGLA
701: SLLPMLDRYV LSSKIQSALG YMAPEFACKT VKITEKCDVY GFGVLALEIL TGRRPVEYLE DDVVVLCDLV RSALEEGRLE DCMDPRLCGE FVMEEAIPII
801: KLGLVCTSQV PSNRPDMGEV LSILEVVRSP QDSPGDEMV

Best Arabidopsis Sequence Match ( AT3G56370.1 )
(BLAST)

001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS

Arabidopsis Description

IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.