CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99087
EES01631
EES09201
EES14272
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56370.1	EER99087	AT5G12900.1	15618632
AT3G56370.1	EES14272	AT5G12900.1	15618632
AT5G01890.1	EES01631	AT2G41090.1	17360592
AT5G01890.1	EES09201	AT2G41090.1	17360592
AT5G01890.1	EES16322	AT2G41090.1	17360592
AT5G01890.1	OQU78227	AT2G41090.1	17360592
AT5G01890.1	KXG37587	AT4G14640.1	17360592
AT5G01890.1	KXG37588	AT4G14640.1	17360592
AT5G01890.1	EES01631	AT5G21274.1	17360592
AT5G01890.1	EES09201	AT5G21274.1	17360592
AT5G01890.1	EES16322	AT5G21274.1	17360592
AT5G01890.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043058_P001	Maize	plasma membrane	94.41	94.31
Os01t0821900-01	Rice	peroxisome, plasma membrane	72.26	88.39
TraesCS3B01G376200.1	Wheat	plasma membrane	86.18	86.36
TraesCS3D01G337800.1	Wheat	plasma membrane	85.86	85.86
TraesCS3A01G344300.1	Wheat	plasma membrane	77.85	84.63
HORVU3Hr1G081050.3	Barley	plastid	73.95	83.55
EES18394	Sorghum	plasma membrane, plastid	72.15	72.46
EER94903	Sorghum	plasma membrane	61.92	60.39
GSMUA_Achr9P04820_001	Banana	plasma membrane	48.42	58.7
GSMUA_Achr6P32490_001	Banana	plasma membrane	47.36	58.62
PGSC0003DMT400042952	Potato	plasma membrane	53.48	56.71
Solyc06g048950.2.1	Tomato	plasma membrane	52.95	56.15
CDX72142	Canola	plasma membrane	54.85	55.56
CDY27220	Canola	plasma membrane	54.85	55.56
Bra007241.1-P	Field mustard	plasma membrane	55.38	54.74
AT3G56370.1	Thale cress	plasma membrane	55.49	54.56
VIT_08s0058g01340.t01	Wine grape	plasma membrane	53.8	54.55
KRH53723	Soybean	plasma membrane	55.17	53.48
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	38.82	53.33
KRH64211	Soybean	plasma membrane	54.75	53.07
PGSC0003DMT400070944	Potato	plasma membrane	53.8	52.63
Solyc06g048620.2.1	Tomato	plasma membrane	53.8	52.52
KRH00443	Soybean	cytosol, nucleus	51.37	52.37
VIT_13s0067g03050.t01	Wine grape	plasma membrane	56.33	51.35
KRH40729	Soybean	plasma membrane	52.32	51.29
KRH76129	Soybean	plasma membrane	51.79	50.67
PGSC0003DMT400068892	Potato	plasma membrane	49.89	50.43
CDY04822	Canola	plasma membrane	49.26	50.32
KRH65414	Soybean	plasma membrane	51.37	50.21
Solyc09g015520.2.1	Tomato	plasma membrane	50.63	49.74
AT5G01890.1	Thale cress	plasma membrane	49.37	48.4
KXG34152	Sorghum	plasma membrane	41.77	35.39
EER95591	Sorghum	plasma membrane	33.33	35.35
OQU91738	Sorghum	cytosol	10.44	29.82
EER89390	Sorghum	plasma membrane	30.17	29.12
KXG31210	Sorghum	plasma membrane	30.06	28.36
EER87774	Sorghum	plasma membrane	29.11	28.22

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:8085398	UniProt:C5XNA5
EnsemblPlants:EES03806	ProteinID:EES03806	ProteinID:EES03806.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714
PFAM:PF08263	PFAM:PF13516	PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF162	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369	EnsemblPlantsGene:SORBI_3003G338200	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A857FE	RefSeq:XP_002458686.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:66127742..66131528

Molecular Weight (calculated)

101412.0 Da

IEP (calculated)

6.459

GRAVY (calculated)

0.086

Length

948 amino acids

Sequence
(BLAST)

001: MAAAAACPLL LLAALLLAVA ATTSALTDDV LALVVFKTDV SDPSGRLATW TEDDDRPCSW PAVGCDARTG RVTSLSLPAA SLSGRLPRAL LRLDALLSLA
101: LPRNNLSGPV LPNLLTALPR LRSLDLSSNR LAAPVPAQLF AQCRAVRAIS LAHNQLSGYI PPAVASCASL VSLNLSSNRL AGPIPDGLWS LPSLRSLDLS
201: GNELSGSVPG GFPRTSSLRE VDLSRNLLAG EIPADVGEAA LLKSLDFGHN LFTGGLPESL RRLTGLRFLG AGGNALAGEL PEWIGEMWAL ERLDFSGNRF
301: AGDIPYTIAN CKNLVEVDLS RNALTGDLPW WVFGLPLQRV SVAGNQLNGW VKVPDDAAMA LRVLDLSSNA FSGEIPLRIT VFAGLQSLNL SSNSFSGQLP
401: AGIGGMRLLE VLDVSANRLE GTVPPEIGGT VALRDLRMGR NSLTGRIPSQ IGNCSSLIAL DFSHNNLMGP IPSSMGNLTS LQVVNLSQNK LNGTLPVELS
501: NLPSLHIFDV SHNMLTGDLP NSRFFNNIPE SFLMDNSGLC SSRKNDSCSA VMPKPIVLNP NSSSNPSSQA TPSAPSNMHH KKIILSISTL IAIAGGAAIA
601: IGVITISVLN RRVRARAAAP RPAPVTALSD DYLSQSPEND ASSGKLVMFG KGSPEFSAGG HALLNKDCEL GRGGFGAVYK TVLRDGQPVA IKKLTVSSLV
701: KSKDDFERQV KTLSKVRHHN IVTLRGFYWT SSLQLLIYDY LPGGNLNKHL HECNEDNLLS WMERFDIILG VARGLTYLHQ HGVIHYNLKS SNVLLDSNGE
801: PKVGDYGLAK LLPMLDRYVL SSKIQSALGY MAPEFACKTV KITEKCDVYG FGVLVLEVLT GRRPVEYLED DVVVLCDLVR SALEEGRPED CIDPRLCGEF
901: PMDEALPIIK LGLVCTSQVP SNRPDMGEVV SILELVRSPQ DSAEDELV

Best Arabidopsis Sequence Match ( AT3G56370.1 )
(BLAST)

001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS

Arabidopsis Description

IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.