Factsheet for Bra028916.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01890.1	Bra000214.1-P	AT2G41090.1	17360592
AT5G01890.1	Bra018296.1-P	AT3G51920.1	17360592
AT5G01890.1	Bra033467.1-P	AT3G51920.1	17360592
AT5G01890.1	Bra039723.1-P	AT4G14640.1	17360592
AT5G01890.1	Bra002368.1-P	AT5G21274.1	17360592
AT5G01890.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04822	Canola	plasma membrane	98.99	73.6
AT5G01890.1	Thale cress	plasma membrane	87.97	62.77
KRH00443	Soybean	cytosol, nucleus	63.62	47.2
Os01t0821900-01	Rice	peroxisome, plasma membrane	51.74	46.06
VIT_08s0058g01340.t01	Wine grape	plasma membrane	62.32	45.99
GSMUA_Achr6P32490_001	Banana	plasma membrane	50.58	45.56
KRH40729	Soybean	plasma membrane	63.33	45.19
Os05t0478300-01	Rice	plasma membrane, plastid, vacuole	51.45	45.11
PGSC0003DMT400068892	Potato	plasma membrane	61.16	44.99
GSMUA_Achr9P04820_001	Banana	plasma membrane	50.87	44.88
KRH76129	Soybean	plasma membrane	61.16	43.55
Solyc09g015520.2.1	Tomato	plasma membrane	60.43	43.21
KRH65414	Soybean	plasma membrane	60.14	42.78
GSMUA_Achr5P29680_001	Banana	plasma membrane	46.38	42.72
Bra007241.1-P	Field mustard	plasma membrane	59.13	42.54
HORVU3Hr1G081050.3	Barley	plastid	51.45	42.31
Os03t0335500-01	Rice	plasma membrane	58.41	41.5
EER94903	Sorghum	plasma membrane	58.41	41.46
Zm00001d029059_P001	Maize	plasma membrane	57.83	41.05
TraesCS4D01G172000.1	Wheat	plasma membrane	57.83	41.01
TraesCS4A01G135200.1	Wheat	plasma membrane	57.83	41.01
TraesCS4B01G169900.1	Wheat	plasma membrane	57.97	40.98
HORVU4Hr1G050250.1	Barley	plasma membrane	57.68	40.9
TraesCS3A01G344300.1	Wheat	plasma membrane	51.3	40.6
Zm00001d043058_P001	Maize	plasma membrane	53.91	39.2
EES03806	Sorghum	plasma membrane	53.33	38.82
TraesCS3D01G337800.1	Wheat	plasma membrane	51.59	37.55
TraesCS3B01G376200.1	Wheat	plasma membrane	51.3	37.42
EES18394	Sorghum	plasma membrane, plastid	50.29	36.76
Zm00001d038481_P001	Maize	plasma membrane, plastid	49.86	35.28
Bra029522.1-P	Field mustard	cytosol	9.57	31.43
Bra025319.1-P	Field mustard	plasma membrane	42.9	29.28
Bra019768.1-P	Field mustard	plasma membrane	36.67	28.43
Bra039063.1-P	Field mustard	plasma membrane	41.74	28.4
Bra010067.1-P	Field mustard	plasma membrane	25.07	24.64
Bra009287.1-P	Field mustard	plasma membrane	30.72	22.65
Bra007759.1-P	Field mustard	plasma membrane	31.59	22.09

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra028916	EnsemblPlants:Bra028916.1
EnsemblPlants:Bra028916.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4EJF0	PFAM:PF00560
PFAM:PF07714	PFAM:PF13855	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000
PANTHER:PTHR27000:SF324	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI00025435C1	SEG:seg	:	:

Description

AT5G01890 (E=6e-260) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA02:+:1408129..1410282

Molecular Weight (calculated)

73969.3 Da

IEP (calculated)

6.665

GRAVY (calculated)

0.126

Length

690 amino acids

Sequence
(BLAST)

001: MKSLASCSLV RLRGNSLLGE IPDWIGEMGS LETLDLSANN FSGNAPFSLG NLLSLKELNL SSNFLAGEIP HSIISNCSNL LSFDASKNSF TGWMLFTGNL
101: SSLGFLQGLR LLDLSSNAFS GEIPSNIWIL TSLLHLNLSA NSLFGSIPTS IGGLKLVEIL DLSSNLLNGT LPSEIGGAVS LKQLNLQRNH LTGHIPPLIS
201: NCSALNTIDL SENKLSGGIS GSIGSLSNLQ YIDLSRNNLS GSLPKQVEKL THLVTFNISH NRITGELPAG GFFNTIPLSA VTGNPSLCGS VVNRSCLSVH
301: PKPIVLNPNS SNPASGPPLS GQIRKSVLSI SALIAIGAAA FIAIGVVAVT LLNVHARSSM SRHDAGAALA MSVGETFSCS PSKDQEFGKL VMFSGEADVF
401: DTRGANALLN KDCELGRGGF GVVYKTSLQD GRPVAVKKLT VSGLIKSQEE FEREMRKLGK LRHRNVVEIK GYYWTQSLQL LIHEFVSGGS LYRHLHGDEC
501: VCLTWRQRFS IILGIARGLA YLHGSNITHY NLKATNVLID AATGEAKVSD FGLARLLASA LDRCVLSGKV QSALGYTAPE FACRTVKITE KCDVYGFGIL
601: VLEVVTGKRP VEYAEDDVMV LCETVREGLE EGRVEECVDA RLRGDFPAEE AIPVVKLGLV CGSQVPSNRP EMEEVVKILE LIQCPSQEFE

Best Arabidopsis Sequence Match ( AT5G01890.1 )
(BLAST)

001: MFNGAVSLLF LFLAVVSARA DPTFNDDVLG LIVFKAGLDD PLSKLSSWNS EDYDPCNWVG CTCDPATNRV SELRLDAFSL SGHIGRGLLR LQFLHTLVLS
101: NNNLTGTLNP EFPHLGSLQV VDFSGNNLSG RIPDGFFEQC GSLRSVSLAN NKLTGSIPVS LSYCSTLTHL NLSSNQLSGR LPRDIWFLKS LKSLDFSHNF
201: LQGDIPDGLG GLYDLRHINL SRNWFSGDVP SDIGRCSSLK SLDLSENYFS GNLPDSMKSL GSCSSIRLRG NSLIGEIPDW IGDIATLEIL DLSANNFTGT
301: VPFSLGNLEF LKDLNLSANM LAGELPQTLS NCSNLISIDV SKNSFTGDVL KWMFTGNSES SSLSRFSLHK RSGNDTIMPI VGFLQGLRVL DLSSNGFTGE
401: LPSNIWILTS LLQLNMSTNS LFGSIPTGIG GLKVAEILDL SSNLLNGTLP SEIGGAVSLK QLHLHRNRLS GQIPAKISNC SALNTINLSE NELSGAIPGS
501: IGSLSNLEYI DLSRNNLSGS LPKEIEKLSH LLTFNISHNN ITGELPAGGF FNTIPLSAVT GNPSLCGSVV NRSCLSVHPK PIVLNPNSSN PTNGPALTGQ
601: IRKSVLSISA LIAIGAAAVI AIGVVAVTLL NVHARSSVSR HDAAAALALS VGETFSCSPS KDQEFGKLVM FSGEVDVFDT TGADALLNKD SELGRGGFGV
701: VYKTSLQDGR PVAVKKLTVS GLIKSQEEFE REMRKLGKLR HKNVVEIKGY YWTQSLQLLI HEFVSGGSLY RHLHGDESVC LTWRQRFSII LGIARGLAFL
801: HSSNITHYNM KATNVLIDAA GEAKVSDFGL ARLLASALDR CVLSGKVQSA LGYTAPEFAC RTVKITDRCD VYGFGILVLE VVTGKRPVEY AEDDVVVLCE
901: TVREGLEEGR VEECVDPRLR GNFPAEEAIP VIKLGLVCGS QVPSNRPEME EVVKILELIQ CPSHDLE

Arabidopsis Description

PXC2Leucine-rich repeat receptor-like protein kinase PXC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.