CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01890.1	KRG89812	AT2G41090.1	17360592
AT5G01890.1	KRG94975	AT2G41090.1	17360592
AT5G01890.1	KRH18664	AT2G41090.1	17360592
AT5G01890.1	KRH31638	AT4G14640.1	17360592
AT5G01890.1	KRH69070	AT4G14640.1	17360592
AT5G01890.1	KRG89812	AT5G21274.1	17360592
AT5G01890.1	KRG94975	AT5G21274.1	17360592
AT5G01890.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00443	Soybean	cytosol, nucleus	92.24	95.91
KRH76129	Soybean	plasma membrane	79.83	79.67
KRH65414	Soybean	plasma membrane	78.59	78.35
VIT_08s0058g01340.t01	Wine grape	plasma membrane	67.84	70.16
PGSC0003DMT400068892	Potato	plasma membrane	63.5	65.46
Solyc09g015520.2.1	Tomato	plasma membrane	64.63	64.77
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	45.19	63.33
CDY04822	Canola	plasma membrane	59.67	62.18
KRH64211	Soybean	plasma membrane	62.77	62.07
AT5G01890.1	Thale cress	plasma membrane	61.43	61.43
KRH53723	Soybean	plasma membrane	61.94	61.25
GSMUA_Achr9P04820_001	Banana	plasma membrane	49.43	61.13
GSMUA_Achr6P32490_001	Banana	plasma membrane	47.88	60.44
GSMUA_Achr5P29680_001	Banana	plasma membrane	46.43	59.95
HORVU4Hr1G050250.1	Barley	plasma membrane	57.6	57.25
TraesCS4D01G172000.1	Wheat	plasma membrane	57.6	57.25
TraesCS4A01G135200.1	Wheat	plasma membrane	57.6	57.25
EER94903	Sorghum	plasma membrane	57.5	57.2
TraesCS4B01G169900.1	Wheat	plasma membrane	57.7	57.17
Os03t0335500-01	Rice	plasma membrane	56.77	56.54
Zm00001d029059_P001	Maize	plasma membrane	56.77	56.48
Os01t0821900-01	Rice	peroxisome, plasma membrane	43.74	54.58
Os05t0478300-01	Rice	plasma membrane, plastid, vacuole	43.74	53.75
TraesCS3B01G376200.1	Wheat	plasma membrane	52.33	53.49
TraesCS3D01G337800.1	Wheat	plasma membrane	52.43	53.48
HORVU3Hr1G081050.3	Barley	plastid	46.33	53.4
TraesCS3A01G344300.1	Wheat	plasma membrane	47.98	53.21
EES03806	Sorghum	plasma membrane	51.29	52.32
Zm00001d043058_P001	Maize	plasma membrane	50.98	51.95
EES18394	Sorghum	plasma membrane, plastid	46.85	47.99
Zm00001d038481_P001	Maize	plasma membrane, plastid	46.85	46.46
KRH70560	Soybean	plasma membrane	44.67	42.9
KRH01549	Soybean	nucleus, plasma membrane	44.16	42.4
KRH27994	Soybean	plasma membrane	33.82	36.99
KRH77441	Soybean	plasma membrane	33.51	36.57
KRH52253	Soybean	plasma membrane	32.06	31.5
KRH61582	Soybean	plasma membrane	32.06	31.47
KRH15603	Soybean	plasma membrane	31.54	31.12
KRH05414	Soybean	plasma membrane	31.33	30.92
KRH35424	Soybean	plasma membrane	31.54	30.84
KRG91394	Soybean	plasma membrane	31.44	30.61
KRH38704	Soybean	plasma membrane	31.02	30.49
KRH09211	Soybean	plasma membrane	31.23	29.93

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100813535	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EMBL:ACUP02006049
EnsemblPlantsGene:GLYMA_09G274600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	UniProt:I1L703	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRH40729
ProteinID:KRH40729	ProteinID:KRH40729.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF324	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00365
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00023C8EEF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:49048463..49052810

Molecular Weight (calculated)

104741.0 Da

IEP (calculated)

5.928

GRAVY (calculated)

0.043

Length

967 amino acids

Sequence
(BLAST)

001: MMQFSMCVLF LILLAPVMLV FSVDTGFNDD VLGLIVFKAG LDDPKRKLSS WNEDDNSPCN WEGVKCDPSS NRVTALVLDG FSLSGHVDRG LLRLQSLQIL
101: SLSRNNFTGS INPDLPLLGS LQVVDLSDNN LSGEIPEGFF QQCGSLRTVS FAKNNLTGKI PESLSSCSNL ASVNFSSNQL HGELPNGVWF LRGLQSLDLS
201: DNFLEGEIPE GIQNLYDMRE LSLQRNRFSG RLPGDIGGCI LLKSLDLSGN FLSELPQSMQ RLTSCTSISL QGNSFTGGIP EWIGELKNLE VLDLSANGFS
301: GWIPKSLGNL DSLHRLNLSR NRLTGNMPDS MMNCTKLLAL DISHNHLAGH VPSWIFKMGV QSISLSGDGF SKGNYPSLKP TPASYHGLEV LDLSSNAFSG
401: VLPSGIGGLG SLQVLNFSTN NISGSIPVGI GDLKSLYIVD LSDNKLNGSI PSEIEGATSL SELRLQKNFL GGRIPAQIDK CSSLTFLILS HNKLTGSIPA
501: AIANLTNLQY VDLSWNELSG SLPKELTNLS HLFSFNVSYN HLEGELPVGG FFNTISFSSV SGNPLLCGSV VNHSCPSVHP KPIVLNPNSS GSNSSISLQN
601: HRHKIILSIS ALIAIGAAAF IAVGVVAVTV LNIHVRSSME HTAAPFSFSG GEDYSGSPAN DPNYGKLVMF SGDADFADGA HNILNKESEI GRGGFGVVYR
701: TFLRDGRAVA IKKLTVSSLI KSQEEFEREI KKLGKVRHPN LVALEGYYWT SSLQLLIYDY LSSGSLHKLL HDDNSKNVFS WPQRFKVILG MAKGLAHLHQ
801: MNIIHYNLKS TNVLIDCSGE PKVGDFGLVK LLPMLDHCVL SSKIQSALGY MAPEFACRTV KITKKCDVYG FGILVLEIVT GKRPVEYMED DVVVLCDMVR
901: GALEEGKVEQ CVDGRLLGNF AAEEAIPVIK LGLICASQVP SNRPDMAEVV NILELIQCPS EGQEELE

Best Arabidopsis Sequence Match ( AT5G01890.1 )
(BLAST)

001: MFNGAVSLLF LFLAVVSARA DPTFNDDVLG LIVFKAGLDD PLSKLSSWNS EDYDPCNWVG CTCDPATNRV SELRLDAFSL SGHIGRGLLR LQFLHTLVLS
101: NNNLTGTLNP EFPHLGSLQV VDFSGNNLSG RIPDGFFEQC GSLRSVSLAN NKLTGSIPVS LSYCSTLTHL NLSSNQLSGR LPRDIWFLKS LKSLDFSHNF
201: LQGDIPDGLG GLYDLRHINL SRNWFSGDVP SDIGRCSSLK SLDLSENYFS GNLPDSMKSL GSCSSIRLRG NSLIGEIPDW IGDIATLEIL DLSANNFTGT
301: VPFSLGNLEF LKDLNLSANM LAGELPQTLS NCSNLISIDV SKNSFTGDVL KWMFTGNSES SSLSRFSLHK RSGNDTIMPI VGFLQGLRVL DLSSNGFTGE
401: LPSNIWILTS LLQLNMSTNS LFGSIPTGIG GLKVAEILDL SSNLLNGTLP SEIGGAVSLK QLHLHRNRLS GQIPAKISNC SALNTINLSE NELSGAIPGS
501: IGSLSNLEYI DLSRNNLSGS LPKEIEKLSH LLTFNISHNN ITGELPAGGF FNTIPLSAVT GNPSLCGSVV NRSCLSVHPK PIVLNPNSSN PTNGPALTGQ
601: IRKSVLSISA LIAIGAAAVI AIGVVAVTLL NVHARSSVSR HDAAAALALS VGETFSCSPS KDQEFGKLVM FSGEVDVFDT TGADALLNKD SELGRGGFGV
701: VYKTSLQDGR PVAVKKLTVS GLIKSQEEFE REMRKLGKLR HKNVVEIKGY YWTQSLQLLI HEFVSGGSLY RHLHGDESVC LTWRQRFSII LGIARGLAFL
801: HSSNITHYNM KATNVLIDAA GEAKVSDFGL ARLLASALDR CVLSGKVQSA LGYTAPEFAC RTVKITDRCD VYGFGILVLE VVTGKRPVEY AEDDVVVLCE
901: TVREGLEEGR VEECVDPRLR GNFPAEEAIP VIKLGLVCGS QVPSNRPEME EVVKILELIQ CPSHDLE

Arabidopsis Description

PXC2Leucine-rich repeat receptor-like protein kinase PXC2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.