CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99087
EES01631
EES09201
EES14272
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56370.1	EER99087	AT5G12900.1	15618632
AT3G56370.1	EES14272	AT5G12900.1	15618632
AT5G01890.1	EES01631	AT2G41090.1	17360592
AT5G01890.1	EES09201	AT2G41090.1	17360592
AT5G01890.1	EES16322	AT2G41090.1	17360592
AT5G01890.1	OQU78227	AT2G41090.1	17360592
AT5G01890.1	KXG37587	AT4G14640.1	17360592
AT5G01890.1	KXG37588	AT4G14640.1	17360592
AT5G01890.1	EES01631	AT5G21274.1	17360592
AT5G01890.1	EES09201	AT5G21274.1	17360592
AT5G01890.1	EES16322	AT5G21274.1	17360592
AT5G01890.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029059_P001	Maize	plasma membrane	95.99	95.99
Os03t0335500-01	Rice	plasma membrane	87.35	87.44
TraesCS4A01G135200.1	Wheat	plasma membrane	84.67	84.58
HORVU4Hr1G050250.1	Barley	plasma membrane	84.47	84.38
TraesCS4D01G172000.1	Wheat	plasma membrane	84.36	84.28
TraesCS4B01G169900.1	Wheat	plasma membrane	84.47	84.12
GSMUA_Achr9P04820_001	Banana	plasma membrane	54.84	68.16
GSMUA_Achr6P32490_001	Banana	plasma membrane	52.78	66.97
PGSC0003DMT400042952	Potato	plasma membrane	57.3	62.3
EES03806	Sorghum	plasma membrane	60.39	61.92
Solyc06g048950.2.1	Tomato	plasma membrane	56.38	61.3
PGSC0003DMT400070944	Potato	plasma membrane	60.29	60.47
Solyc06g048620.2.1	Tomato	plasma membrane	60.19	60.25
VIT_08s0058g01340.t01	Wine grape	plasma membrane	57.92	60.21
CDX72142	Canola	plasma membrane	57.92	60.15
CDY27220	Canola	plasma membrane	57.92	60.15
KRH64211	Soybean	plasma membrane	60.49	60.12
KRH53723	Soybean	plasma membrane	60.29	59.92
Bra007241.1-P	Field mustard	plasma membrane	59.05	59.85
AT3G56370.1	Thale cress	plasma membrane	58.64	59.13
VIT_13s0067g03050.t01	Wine grape	plasma membrane	62.96	58.85
KRH00443	Soybean	cytosol, nucleus	56.17	58.71
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	41.46	58.41
EES18394	Sorghum	plasma membrane, plastid	56.07	57.73
KRH40729	Soybean	plasma membrane	57.2	57.5
KRH76129	Soybean	plasma membrane	56.07	56.24
PGSC0003DMT400068892	Potato	plasma membrane	53.5	55.44
CDY04822	Canola	plasma membrane	52.78	55.28
KRH65414	Soybean	plasma membrane	54.84	54.95
Solyc09g015520.2.1	Tomato	plasma membrane	53.91	54.3
AT5G01890.1	Thale cress	plasma membrane	52.78	53.05
EER95591	Sorghum	plasma membrane	36.01	39.15
KXG34152	Sorghum	plasma membrane	44.24	38.43
OQU91738	Sorghum	cytosol	11.11	32.53
EER89390	Sorghum	plasma membrane	32.0	31.67
EER87774	Sorghum	plasma membrane	30.76	30.57
KXG31210	Sorghum	plasma membrane	31.48	30.45

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:8082337	UniProt:C5X0T5
EnsemblPlants:EER94903	ProteinID:EER94903	ProteinID:EER94903.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369	EnsemblPlantsGene:SORBI_3001G381100	SUPFAM:SSF52058
SUPFAM:SSF56112	unigene:Sbi.8788	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A82DEE
RefSeq:XP_002467905.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:66890340..66894214

Molecular Weight (calculated)

102756.0 Da

IEP (calculated)

5.545

GRAVY (calculated)

0.091

Length

972 amino acids

Sequence
(BLAST)

001: MRPLALLVLA HLAALVAAAE AKGGAAGAGL GDDVLGLIVF KADVSDPDGR LATWSEDDER PCAWGGVTCD ARTGRVSALS LAGFGLSGKL GRGLLRLEAL
101: QSLSLARNNL SGDVPAELAR LPALQTLDLS ANAFAGAIPE GLFGRCRSLR DVSLAGNAFS GGIPRDVAAC ATLASLNLSS NLLAGALPSD IWSLNALRTL
201: DISGNAVTGD LPIGISRMFN LRALNLRGNR LTGSLPDDIG DCPLLRSLDL GSNSLSGDLP ESLRRLSTCT YLDLSSNEFT GSVPTWFGEM GSLEILDLSG
301: NKFSGEIPGS IGGLMSLREL RLSGNGFTGA LPESIGGCKS LMHVDVSWNS LTGALPSWVL GSGVQWVSVS QNTLSGEVKV PANASSVLQG VDLSNNAFSG
401: VIPSEISKLQ NLHSLNMSWN SMSGSIPASI LEMKSLEVLD LTANRLNGCI PASTGGESLQ ELRLGKNFLT GNIPAQIGNC SSLASLDLSH NNLTGGIPET
501: ISNLTNLEIV DLSQNKLTGV LPKQLSNLPH LLQFNVSHNQ LSGDLPPGSF FDTIPLSSVS DNPGLCGAKL NSSCPGVLPK PIVLNPNTSS DPISPTEPVP
601: DGGRHHKKTI LSISALVAIG AAALIAVGVI TITVLNLRVR APGSHSGAAL ELSDGYLSQS PTTDMNAGKL VMFGGGNPEF SASTHALLNK DCELGRGGFG
701: TVYKTTLRDG QPVAIKKLTV SSLVKSQVEF EREVKMLGKL RHRNLVALKG YYWTPSLQLL IYEFVSGGNL HKQLHESSTT NCLSWKERFD IVLGIARSLA
801: HLHRHDIIHY NLKSSNILLD GSGEAKVGDY GLAKLLPMLD RYVLSSKVQS ALGYMAPEFA CRTVKITEKC DVYGFGVLIL EILTGRTPVE YMEDDVIVLC
901: DVVRAALDEG KVEECVDERL CGKFPLEEAV PIMKLGLVCT SQVPSNRPDM NEVVNILELI RCPQDSPETE LG

Best Arabidopsis Sequence Match ( AT3G56370.1 )
(BLAST)

001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS

Arabidopsis Description

IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.