CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER94903
EES03806
EES18394

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G12900.1	EER94903	AT3G56370.1	15618632
AT5G12900.1	EES03806	AT3G56370.1	15618632
AT5G12900.1	EES18394	AT3G56370.1	15618632

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031444_P001	Maize	plastid	87.85	88.87
Zm00001d052889_P001	Maize	cytosol, nucleus, peroxisome, plastid	81.44	82.39
Os08t0508100-01	Rice	plastid	80.13	80.93
TraesCS7D01G244400.1	Wheat	plastid	74.22	76.09
TraesCS7A01G245900.1	Wheat	plastid	74.38	75.88
TraesCS7B01G145600.1	Wheat	plastid	74.55	75.79
HORVU7Hr1G050500.2	Barley	endoplasmic reticulum	61.08	68.38
Solyc01g014110.2.1	Tomato	endoplasmic reticulum, extracellular	8.05	64.47
GSMUA_Achr9P20170_001	Banana	cytosol	33.99	62.16
GSMUA_Achr9P27740_001	Banana	cytosol, nucleus, peroxisome	58.29	61.0
EER99087	Sorghum	plastid	58.29	60.17
GSMUA_Achr3P03800_001	Banana	nucleus	54.19	57.89
GSMUA_Achr9P12540_001	Banana	nucleus	53.04	56.27
GSMUA_Achr8P25600_001	Banana	cytosol, nucleus, peroxisome	55.01	52.67
CDY67745	Canola	plastid	31.36	52.33
VIT_06s0004g01680.t01	Wine grape	cytosol	50.41	51.95
KRH10167	Soybean	nucleus	46.63	49.13
GSMUA_Achr7P02030_001	Banana	cytosol	51.07	49.13
KRH29674	Soybean	cytosol	46.96	48.64
KRH24675	Soybean	nucleus	46.8	48.39
KRH23169	Soybean	nucleus, plastid	44.34	48.13
Solyc01g006690.2.1	Tomato	nucleus	47.78	47.86
PGSC0003DMT400055002	Potato	nucleus	47.78	47.24
Bra023381.1-P	Field mustard	nucleus	35.96	46.6
PGSC0003DMT400081474	Potato	cytosol	45.81	46.42
CDX85683	Canola	nucleus	36.12	46.12
CDX91157	Canola	nucleus	35.8	45.8
Bra008872.1-P	Field mustard	plastid	38.1	44.62
CDY53973	Canola	nucleus	39.24	44.01
Bra006167.1-P	Field mustard	plastid	36.45	43.87
CDY55867	Canola	cytosol	38.92	43.81
AT5G12900.1	Thale cress	nucleus, plastid	39.9	43.24
CDX70481	Canola	cytosol	37.11	41.85
Solyc01g014120.2.1	Tomato	cytosol, nucleus	18.72	33.14
Solyc01g014380.2.1	Tomato	nucleus	15.11	30.16
KXG39773	Sorghum	cytosol, nucleus, plastid	18.72	25.97

Protein Annotations

EnsemblPlants:EES14272	EnsemblPlantsGene:SORBI_3007G210900	EntrezGene:8064031	ncoils:Coil	PANTHER:PTHR31029	PANTHER:PTHR31029:SF3
ProteinID:EES14272	ProteinID:EES14272.1	RefSeq:XP_002444777.1	SEG:seg	UniParc:UPI0001A87EB2	UniProt:C5YIS9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:63982034..63985574

Molecular Weight (calculated)

67707.4 Da

IEP (calculated)

7.647

GRAVY (calculated)

-0.345

Length

609 amino acids

Sequence
(BLAST)

001: MAADATATAS ASASSSSAAY LPPALPTSRL DIQAAVAKAA ELRALHAALL QGGGGGASNA GTYASASRSP AVIRLPPAAS PALTRPVLLP AAAEDYPVFA
101: PTYDEEPLGG MNYIRQDNRS LSENWSGIGL DHDGLEDEVA FSDFDNHNTF SSSNSELHFS SSNEHLRNRK ACRNHLLLLQ PTLSADSLIR SASRLTDLTE
201: FKAVTTCNTC KPATISRDTE ADAKSLKNLN STAPLSNYHP AAFSRTRHKG PHILSWLLPK SKRKPKSDMS PNTIECENMS QLLKDWGVFS LESLKKEVVE
301: ANEHRDAALQ EVSEMKLSLG ELTTKLVSLE AYCSELKKAL KQATSAKNMQ CHSKRSTRSV SGSRDNSLPV SHEVMVEGFL QIVSEARLSI KQFCKVLIQQ
401: VEDADNGLSD KLNLLLQPYQ ITLSDKHPKL VLYHLEALMN QAMYQDFENC TFQKNGSPKC LDPKQDRQES FASFVALRNL SWNEVLKKGT KYHCEDFSRF
501: CDQKMSCIVS TLNWSWPWAE QLLQCFFVAS KCIWLLHLLA FSFSPPLTIL RVEENRAFDQ TYMEDVLFDK QRSQNHPLPS SSQVKLMVLP GFYVQDRLLK
601: CRVLCRYNS

Best Arabidopsis Sequence Match ( AT5G12900.1 )
(BLAST)

001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG

Arabidopsis Description

IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.