Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G244400.1 | Wheat | plastid | 97.49 | 97.98 |
| TraesCS7B01G145600.1 | Wheat | plastid | 96.98 | 96.66 |
| HORVU7Hr1G050500.2 | Barley | endoplasmic reticulum | 73.87 | 81.07 |
| Os08t0508100-01 | Rice | plastid | 76.88 | 76.12 |
| EES14272 | Sorghum | plastid | 75.88 | 74.38 |
| Zm00001d031444_P001 | Maize | plastid | 72.36 | 71.76 |
| Zm00001d052889_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 66.33 | 65.78 |
| GSMUA_Achr9P20170_001 | Banana | cytosol | 33.5 | 60.06 |
| GSMUA_Achr9P27740_001 | Banana | cytosol, nucleus, peroxisome | 57.45 | 58.93 |
| TraesCS5A01G265200.2 | Wheat | plastid | 57.96 | 55.36 |
| GSMUA_Achr3P03800_001 | Banana | nucleus | 52.6 | 55.09 |
| Solyc01g014110.2.1 | Tomato | endoplasmic reticulum, extracellular | 6.87 | 53.95 |
| GSMUA_Achr9P12540_001 | Banana | nucleus | 50.59 | 52.61 |
| GSMUA_Achr8P25600_001 | Banana | cytosol, nucleus, peroxisome | 54.1 | 50.79 |
| CDY67745 | Canola | plastid | 30.32 | 49.59 |
| VIT_06s0004g01680.t01 | Wine grape | cytosol | 48.74 | 49.24 |
| KRH10167 | Soybean | nucleus | 47.07 | 48.62 |
| KRH23169 | Soybean | nucleus, plastid | 44.56 | 47.42 |
| KRH24675 | Soybean | nucleus | 46.73 | 47.37 |
| KRH29674 | Soybean | cytosol | 46.23 | 46.94 |
| GSMUA_Achr7P02030_001 | Banana | cytosol | 49.75 | 46.92 |
| Bra023381.1-P | Field mustard | nucleus | 35.85 | 45.53 |
| CDX85683 | Canola | nucleus | 36.35 | 45.49 |
| CDX91157 | Canola | nucleus | 35.85 | 44.96 |
| PGSC0003DMT400081474 | Potato | cytosol | 45.23 | 44.93 |
| Solyc01g006690.2.1 | Tomato | nucleus | 45.73 | 44.9 |
| PGSC0003DMT400055002 | Potato | nucleus | 46.06 | 44.64 |
| AT5G12900.1 | Thale cress | nucleus, plastid | 40.7 | 43.24 |
| Bra008872.1-P | Field mustard | plastid | 37.52 | 43.08 |
| CDY53973 | Canola | nucleus | 38.86 | 42.73 |
| CDY55867 | Canola | cytosol | 38.36 | 42.33 |
| Bra006167.1-P | Field mustard | plastid | 35.51 | 41.9 |
| CDX70481 | Canola | cytosol | 37.02 | 40.93 |
| Solyc01g014120.2.1 | Tomato | cytosol, nucleus | 19.26 | 33.43 |
| Solyc01g014380.2.1 | Tomato | nucleus | 15.91 | 31.15 |
| TraesCS4A01G080000.2 | Wheat | peroxisome, plastid | 18.93 | 25.86 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G245900.1 | EnsemblPlantsGene:TraesCS7A01G245900 | ncoils:Coil | PANTHER:PTHR31029 | PANTHER:PTHR31029:SF3 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:224089046..224091877
Molecular Weight (calculated)
66015.1 Da
IEP (calculated)
7.998
GRAVY (calculated)
-0.414
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEAASAPS SSARPPAAFP ATRQEIQAAI AKATELRALH AALLQGGGAN AAAYAGAGAG AGRSPAVISV PPAASPAFPR AAAVAEDYPV FTPAYGEEPL
101: GGMNYIRQDN RSLSENWSGI GLDHEGAEDE VAFSDVDNHN TFSSSNSELH FSSSNEHTRN RIPRRNHHSF LHPALSADSF LKSASRRTDS AESKATTTCN
201: TCKPATISRA PEADANAPKN LSSVVTQSNH HPSVGSRTRQ KGTNVLSWLL PKSKRKTKSD MSPSTAECEN MSQLLKEWGV FSLESLKKEL AEANEHRDAA
301: LQEVGEMRSS LGELTSKLLS LEAYSSELKK ALKKATSTKN NVQSHSKRSA RSVGVSRDDS LPVSQEVMVE GFLQIVSEAR LSIKQFCKML LQQVEDADNG
401: LADKLNLLLQ PYQLTLADKH SKVILYHLEA LMNQAMYQDF ENCTFQKNGS PRCLDPKQDL QENFASFVAL RNLSWNEVLK KGTKYYCEDF SRFCDQKMSC
501: IVSTLSWSWP WAEQLLQCFF VAAKCIWLLH LLAFSFSPPL MVLRVEENRA FDPMYMEEIQ VERQRSQQNP SRVKIMAMPG FYVQDRVLKC RVICRYS
101: GGMNYIRQDN RSLSENWSGI GLDHEGAEDE VAFSDVDNHN TFSSSNSELH FSSSNEHTRN RIPRRNHHSF LHPALSADSF LKSASRRTDS AESKATTTCN
201: TCKPATISRA PEADANAPKN LSSVVTQSNH HPSVGSRTRQ KGTNVLSWLL PKSKRKTKSD MSPSTAECEN MSQLLKEWGV FSLESLKKEL AEANEHRDAA
301: LQEVGEMRSS LGELTSKLLS LEAYSSELKK ALKKATSTKN NVQSHSKRSA RSVGVSRDDS LPVSQEVMVE GFLQIVSEAR LSIKQFCKML LQQVEDADNG
401: LADKLNLLLQ PYQLTLADKH SKVILYHLEA LMNQAMYQDF ENCTFQKNGS PRCLDPKQDL QENFASFVAL RNLSWNEVLK KGTKYYCEDF SRFCDQKMSC
501: IVSTLSWSWP WAEQLLQCFF VAAKCIWLLH LLAFSFSPPL MVLRVEENRA FDPMYMEEIQ VERQRSQQNP SRVKIMAMPG FYVQDRVLKC RVICRYS
001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG
Arabidopsis Description
IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.