Factsheet for Os08t0508100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0821900-01
Os03t0335500-01
Os05t0478300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G12900.1	Os01t0821900-01	AT3G56370.1	15618632
AT5G12900.1	Os03t0335500-01	AT3G56370.1	15618632
AT5G12900.1	Os05t0478300-01	AT3G56370.1	15618632

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14272	Sorghum	plastid	80.93	80.13
TraesCS7D01G244400.1	Wheat	plastid	76.62	77.78
Zm00001d031444_P001	Maize	plastid	77.11	77.24
TraesCS7A01G245900.1	Wheat	plastid	76.12	76.88
TraesCS7B01G145600.1	Wheat	plastid	76.29	76.79
Zm00001d052889_P001	Maize	cytosol, nucleus, peroxisome, plastid	71.48	71.59
HORVU7Hr1G050500.2	Barley	endoplasmic reticulum	63.52	70.4
Solyc01g014110.2.1	Tomato	endoplasmic reticulum, extracellular	8.29	65.79
GSMUA_Achr9P20170_001	Banana	cytosol	34.99	63.36
Os09t0488800-01	Rice	plastid	64.18	63.24
GSMUA_Achr9P27740_001	Banana	cytosol, nucleus, peroxisome	57.38	59.45
GSMUA_Achr3P03800_001	Banana	nucleus	53.4	56.49
GSMUA_Achr9P12540_001	Banana	nucleus	51.91	54.53
GSMUA_Achr8P25600_001	Banana	cytosol, nucleus, peroxisome	56.38	53.46
CDY67745	Canola	plastid	31.68	52.33
VIT_06s0004g01680.t01	Wine grape	cytosol	51.24	52.28
KRH10167	Soybean	nucleus	48.76	50.87
KRH24675	Soybean	nucleus	48.42	49.58
KRH23169	Soybean	nucleus, plastid	46.1	49.55
KRH29674	Soybean	cytosol	47.93	49.15
GSMUA_Achr7P02030_001	Banana	cytosol	51.08	48.66
Solyc01g006690.2.1	Tomato	nucleus	47.93	47.53
PGSC0003DMT400081474	Potato	cytosol	46.93	47.09
PGSC0003DMT400055002	Potato	nucleus	48.09	47.08
Bra023381.1-P	Field mustard	nucleus	36.48	46.81
CDX85683	Canola	nucleus	36.98	46.75
CDX91157	Canola	nucleus	36.48	46.22
Bra008872.1-P	Field mustard	plastid	38.31	44.42
CDY53973	Canola	nucleus	39.97	44.38
AT5G12900.1	Thale cress	nucleus, plastid	41.29	44.31
CDY55867	Canola	cytosol	39.64	44.18
Bra006167.1-P	Field mustard	plastid	36.48	43.48
CDX70481	Canola	cytosol	37.81	42.22
Solyc01g014120.2.1	Tomato	cytosol, nucleus	19.73	34.59
Solyc01g014380.2.1	Tomato	nucleus	15.75	31.15
Os03t0249100-01	Rice	plasma membrane	18.74	25.39

Protein Annotations

EMBL:AK242921	EnsemblPlants:Os08t0508100-01	EnsemblPlantsGene:Os08g0508100	EntrezGene:4345989	ncoils:Coil	PANTHER:PTHR31029
PANTHER:PTHR31029:SF5	ProteinID:BAD10240.1	ProteinID:BAD10656.1	ProteinID:BAT06173.1	RefSeq:XP_015648068.1	SEG:seg
UniParc:UPI000023B040	UniProt:Q6YVT7	MapMan:35.1	:	:	:

Description

Conserved hypothetical protein. (Os08t0508100-01)

Coordinates

chr8:-:25156907..25159842

Molecular Weight (calculated)

67353.9 Da

IEP (calculated)

7.693

GRAVY (calculated)

-0.431

Length

603 amino acids

Sequence
(BLAST)

001: MAAEATTSSS SSTHHPPHAT AAVPAPATRH EIQAAIAKAT ELRALHAALL QGQGAAAANA GSAYSRSPAA SLIRLPPGAS PALSKAAAAA VAEDYPVFTP
101: TYDEEALSGM NYIRQDNRSL SENWSGIGLD HEGQEDEVAF SDFDNHNTFS SSNSELHFSS SNEHRRNRMG CRNHPSFLQP ALSTDSFIKS ASKRTDLAEF
201: KAVTTCNTCK PATISRHPEA DVDALKNLSS RVPPQSNYHP SICSRPRQKG PHILSWLLPK SKRKVKSDMS PNTVECENMS QLLKEWGVFS LESLKKELAE
301: ANENRDAALQ EAAEMKSSLG ELTTKLVSLE GYCSELKKAL KQATSTKNMI SHSKRSARSL AVSRDNSMPV SHEVMVEGFL QIVSEARLSI KQFCKVLIQQ
401: VEDADNGLSD KLNLLLQPYQ VTLTDKHPKV VLYHLEALMN QAMYQDFENC TFQKNGPPKY LDPKEDRQEN FASFVALRNL SWNEVLKKGT KYHCEDFSRF
501: CDQKMSCIVS MLNWSWPWAE QLLQCFFVAS KCIWLLHLLA FSFSPPLVIL RVEENRAFDQ MYMEDIHLDK QRSQNPCQVK IMVTPGFYVQ DRVLKCRVLG
601: RYS

Best Arabidopsis Sequence Match ( AT5G12900.1 )
(BLAST)

001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG

Arabidopsis Description

IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.