Factsheet for Os03t0249100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G224300.1	Wheat	peroxisome, plastid	78.2	80.0
TraesCS4A01G080000.2	Wheat	peroxisome, plastid	77.75	79.18
Zm00001d028423_P001	Maize	plastid	74.61	77.21
TraesCS4B01G224000.1	Wheat	plastid	75.73	76.07
Zm00001d047916_P001	Maize	plastid	71.91	74.59
KXG39773	Sorghum	cytosol, nucleus, plastid	69.89	70.84
HORVU4Hr1G063050.1	Barley	mitochondrion	35.73	60.23
CDY19343	Canola	cytosol	13.26	54.63
GSMUA_Achr5P18790_001	Banana	mitochondrion	35.96	44.69
GSMUA_Achr8P19390_001	Banana	plastid	38.43	42.96
CDY21046	Canola	nucleus, plastid	35.96	36.12
CDX98071	Canola	nucleus, plastid	36.85	35.42
KRH60459	Soybean	nucleus	34.61	34.92
CDY31261	Canola	nucleus, plastid	36.63	34.1
PGSC0003DMT400010099	Potato	plastid	35.96	33.54
Solyc08g079510.2.1	Tomato	plastid	35.28	33.19
AT1G12330.1	Thale cress	nucleus	37.53	33.07
Bra019759.1-P	Field mustard	plastid	37.53	32.81
CDY30072	Canola	nucleus, plastid	37.75	32.68
VIT_02s0241g00060.t01	Wine grape	plastid	34.61	32.35
KRH41761	Soybean	plastid	35.73	32.25
Bra016777.1-P	Field mustard	nucleus, plastid	35.28	31.72
CDY53856	Canola	cytosol, plastid	21.12	29.75
Bra028382.1-P	Field mustard	cytosol	18.65	24.27
Os09t0488800-01	Rice	plastid	27.19	19.77
Os08t0508100-01	Rice	plastid	25.39	18.74

Protein Annotations

EMBL:AK106841	EnsemblPlants:Os03t0249100-01	EnsemblPlantsGene:Os03g0249100	EntrezGene:4332254	ncoils:Coil	PANTHER:PTHR31029
PANTHER:PTHR31029:SF4	ProteinID:ABF94973.1	ProteinID:BAF11471.1	ProteinID:BAS83272.1	ProteinID:EEE58702.1	RefSeq:XP_015629219.1
SEG:seg	UniParc:UPI0000DB491D	UniProt:Q10P30	MapMan:35.1	:	:

Description

Conserved hypothetical protein. (Os03t0249100-01)

Coordinates

chr3:+:7871494..7873366

Molecular Weight (calculated)

46746.0 Da

IEP (calculated)

9.506

GRAVY (calculated)

-0.247

Length

445 amino acids

Sequence
(BLAST)

001: MVSSPSPSSP FPAAAVSDAR RAGGGRTTAS EVDEKYAHVA TPLHNHRGGS GGAKKTPRRA KSEGGGGADP AAYVAAVSCS DCRFKQRLHA PASPGPGAVI
101: RSLFVSLTRR STPRSSPSPT SASGGDGGES EQWRLAAADL SRRLAAATRT RDEALEETTR LKHSLTELEM KLARLEARVL PTPTAAAFPV ESFLRAVSTA
201: RAAVRSLTRA LSNHLRSPVN PGPNLESFLN RAFHADFELD TEGDVHTADP AGRCEANLAA YHSIAALTWE EVLLHGTKHY SEGLSRFCDA KMSEVVSSLG
301: WARARAWPEP LLQAFFLAAK GVWGVRLLAR SVHPPLPVVR VDRGARFDSR FMEDAAAGRA GKLEPASVKM MVAPGFHVYV ACAGVVKCKV VCFYSSSSSS
401: RTGGHRDGGS IANGSVGLGS SCSDVNGSAT DAVDGCNNQS SSVVT

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.