Factsheet for TraesCS4D01G224300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G080000.2	Wheat	peroxisome, plastid	98.16	97.71
TraesCS4B01G224000.1	Wheat	plastid	94.02	92.33
HORVU4Hr1G063050.1	Barley	mitochondrion	48.28	79.55
Zm00001d028423_P001	Maize	plastid	78.39	79.3
Os03t0249100-01	Rice	plasma membrane	80.0	78.2
Zm00001d047916_P001	Maize	plastid	76.78	77.86
KXG39773	Sorghum	cytosol, nucleus, plastid	72.87	72.21
CDY19343	Canola	cytosol	13.1	52.78
GSMUA_Achr5P18790_001	Banana	mitochondrion	37.47	45.53
GSMUA_Achr8P19390_001	Banana	plastid	40.46	44.22
CDY21046	Canola	nucleus, plastid	38.85	38.15
CDX98071	Canola	nucleus, plastid	37.93	35.64
CDY31261	Canola	nucleus, plastid	38.39	34.94
KRH60459	Soybean	nucleus	35.17	34.69
AT1G12330.1	Thale cress	nucleus	39.08	33.66
VIT_02s0241g00060.t01	Wine grape	plastid	36.55	33.4
Solyc08g079510.2.1	Tomato	plastid	36.09	33.19
PGSC0003DMT400010099	Potato	plastid	36.32	33.12
KRH41761	Soybean	plastid	37.47	33.06
Bra016777.1-P	Field mustard	nucleus, plastid	37.47	32.93
CDY30072	Canola	nucleus, plastid	38.85	32.88
Bra019759.1-P	Field mustard	plastid	38.16	32.61
CDY53856	Canola	cytosol, plastid	21.15	29.11
Bra028382.1-P	Field mustard	cytosol	18.85	23.98
TraesCS5D01G273100.1	Wheat	plastid	27.82	19.64
TraesCS7D01G244400.1	Wheat	plastid	25.98	19.02

Protein Annotations

EnsemblPlants:TraesCS4D01G224300.1	EnsemblPlantsGene:TraesCS4D01G224300	ncoils:Coil	PANTHER:PTHR31029	PANTHER:PTHR31029:SF4	SEG:seg
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:381098788..381100219

Molecular Weight (calculated)

45867.1 Da

IEP (calculated)

9.801

GRAVY (calculated)

-0.264

Length

435 amino acids

Sequence
(BLAST)

001: MVSSPSPSPP TFTSAVSETK RHAGVPTTAS EKLDQKYAHS ATPLHGHGHG GGAKKTPRRG RSEGGAADSA AYVAAVSCSD CRFKQRALAP ASPGAVIRSL
101: FVSLTRRSTP RSSPSPTSAS EGDAGEGEQW RLAAADLSRR LAAATRTRDD AVEETSRLKQ SLAELELKLA RLEARVLPTP AAAVFPVESF LRAVSTARAT
201: VRNLTRALST HLRSPASPGP NLESFLNRAF HADFELDTEG DVHTADPAGR CEANLAAYHA VAALTWEEVL IHGTKHYSDG LSRFCDAKMS EVVSSLGWAR
301: ARPWPEPLLQ AFFLAAKGVW GVRLLARSVH PPLPVVRVDR GARFDSRFME DAAASRAGRL EPASVKMMVA PGFHVYVAGA GVVKCKVVCF YNNSRTGGHI
401: GGGSSANGGE GLGSSCSDMN GGGTDAVKSC QSSRV

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.