Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G265200.2 | Wheat | plastid | 94.48 | 93.12 |
| TraesCS5B01G264800.2 | Wheat | plastid | 93.67 | 92.77 |
| HORVU5Hr1G073320.1 | Barley | nucleus | 78.73 | 92.03 |
| HORVU5Hr1G073290.4 | Barley | cytosol, nucleus, plastid | 90.58 | 86.92 |
| EER99087 | Sorghum | plastid | 66.72 | 69.66 |
| Zm00001d020937_P001 | Maize | plastid | 65.75 | 69.11 |
| Os09t0488800-01 | Rice | plastid | 67.86 | 68.3 |
| Zm00001d006025_P001 | Maize | plastid | 65.1 | 66.06 |
| Solyc01g014110.2.1 | Tomato | endoplasmic reticulum, extracellular | 7.14 | 57.89 |
| TraesCS7D01G244400.1 | Wheat | plastid | 55.36 | 57.41 |
| GSMUA_Achr9P20170_001 | Banana | cytosol | 30.68 | 56.76 |
| GSMUA_Achr9P27740_001 | Banana | cytosol, nucleus, peroxisome | 48.54 | 51.37 |
| GSMUA_Achr9P12540_001 | Banana | nucleus | 46.1 | 49.48 |
| GSMUA_Achr3P03800_001 | Banana | nucleus | 45.78 | 49.47 |
| CDY67745 | Canola | plastid | 29.06 | 49.04 |
| VIT_06s0004g01680.t01 | Wine grape | cytosol | 46.27 | 48.22 |
| GSMUA_Achr8P25600_001 | Banana | cytosol, nucleus, peroxisome | 48.21 | 46.7 |
| KRH10167 | Soybean | nucleus | 43.18 | 46.02 |
| KRH24675 | Soybean | nucleus | 43.99 | 46.01 |
| KRH29674 | Soybean | cytosol | 43.34 | 45.41 |
| CDX85683 | Canola | nucleus | 34.58 | 44.65 |
| Bra023381.1-P | Field mustard | nucleus | 33.77 | 44.26 |
| KRH23169 | Soybean | nucleus, plastid | 40.26 | 44.21 |
| Solyc01g006690.2.1 | Tomato | nucleus | 43.18 | 43.75 |
| CDX91157 | Canola | nucleus | 33.77 | 43.7 |
| PGSC0003DMT400081474 | Potato | cytosol | 42.53 | 43.59 |
| PGSC0003DMT400055002 | Potato | nucleus | 43.18 | 43.18 |
| CDY53973 | Canola | nucleus | 36.53 | 41.44 |
| GSMUA_Achr7P02030_001 | Banana | cytosol | 42.37 | 41.23 |
| Bra008872.1-P | Field mustard | plastid | 34.74 | 41.15 |
| AT5G12900.1 | Thale cress | nucleus, plastid | 37.5 | 41.1 |
| CDY55867 | Canola | cytosol | 35.88 | 40.85 |
| Bra006167.1-P | Field mustard | plastid | 33.44 | 40.71 |
| CDX70481 | Canola | cytosol | 35.06 | 40.0 |
| Solyc01g014120.2.1 | Tomato | cytosol, nucleus | 17.69 | 31.69 |
| TraesCS4D01G224300.1 | Wheat | peroxisome, plastid | 19.64 | 27.82 |
| Solyc01g014380.2.1 | Tomato | nucleus | 13.64 | 27.54 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G273100.1 | EnsemblPlantsGene:TraesCS5D01G273100 | ncoils:Coil | PANTHER:PTHR31029 | PANTHER:PTHR31029:SF5 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:375801167..375803466
Molecular Weight (calculated)
67556.0 Da
IEP (calculated)
8.597
GRAVY (calculated)
-0.419
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAAAEASD HAAPSRVPLP ATRQEVQAAV AKAVELRALH AALRQRAAPP NAGARASASR SPATIRLPPA ASPARSRTTV TAAVDEDYPV FTPTYDEEPM
101: AMAAGLNDIC HDNRSRSENW GGITLDRGGV GDEAAYSDYD DCINGFSSCN SDFHYASENH LRSRGVNRIH PAFLQSAPLA GRFPASAGRV AEFKVPSSSG
201: GAFRPATIGR DNGGSDAEAL RFLGSSNRVP FSSSNQPPPS AHSRAKQRGS QILSWLFAKA KKKAKPETPP PTAAVIERGN MSQLLKEWGL LSLDSLRKEL
301: AEANAHRDAA QEDAAEMRSS LGELTTKMMS LEAYCSELKK ALRQATDHSG GTDTQSHSRR SSSRSIGASR ELPGNGMPVS HEAMVEGFLQ IASEARLSVK
401: QLCKALIQQV EEPDNGLSDK LNQLLRPHQL AIAGRHCSKA VLYHLEAIMN QTLYQDFENP SFQRNGAARH LDPGQGRRES FASFVALRNL SWSEVLRKGT
501: RYYSEDLSRF CDQKMSCVVA ALSWSWPWPE QLLQCFFVAT KCVWLLHLLA FSFAPPLPIL RVEDGRAFDQ AYMEDILPDR RQVQDPLRVK VMVMPGFYVQ
601: DRVLKCKVLT TKQLDQ
101: AMAAGLNDIC HDNRSRSENW GGITLDRGGV GDEAAYSDYD DCINGFSSCN SDFHYASENH LRSRGVNRIH PAFLQSAPLA GRFPASAGRV AEFKVPSSSG
201: GAFRPATIGR DNGGSDAEAL RFLGSSNRVP FSSSNQPPPS AHSRAKQRGS QILSWLFAKA KKKAKPETPP PTAAVIERGN MSQLLKEWGL LSLDSLRKEL
301: AEANAHRDAA QEDAAEMRSS LGELTTKMMS LEAYCSELKK ALRQATDHSG GTDTQSHSRR SSSRSIGASR ELPGNGMPVS HEAMVEGFLQ IASEARLSVK
401: QLCKALIQQV EEPDNGLSDK LNQLLRPHQL AIAGRHCSKA VLYHLEAIMN QTLYQDFENP SFQRNGAARH LDPGQGRRES FASFVALRNL SWSEVLRKGT
501: RYYSEDLSRF CDQKMSCVVA ALSWSWPWPE QLLQCFFVAT KCVWLLHLLA FSFAPPLPIL RVEDGRAFDQ AYMEDILPDR RQVQDPLRVK VMVMPGFYVQ
601: DRVLKCKVLT TKQLDQ
001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
Arabidopsis Description
Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.