Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G12900.1 | KRH53723 | AT3G56370.1 | 15618632 |
| AT5G12900.1 | KRH64211 | AT3G56370.1 | 15618632 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23169 | Soybean | nucleus, plastid | 90.66 | 93.4 |
| Solyc01g014110.2.1 | Tomato | endoplasmic reticulum, extracellular | 10.21 | 77.63 |
| KRH24675 | Soybean | nucleus | 75.43 | 74.02 |
| KRH29674 | Soybean | cytosol | 72.66 | 71.43 |
| VIT_06s0004g01680.t01 | Wine grape | cytosol | 71.28 | 69.71 |
| CDY67745 | Canola | plastid | 39.62 | 62.74 |
| Solyc01g006690.2.1 | Tomato | nucleus | 65.74 | 62.5 |
| PGSC0003DMT400055002 | Potato | nucleus | 66.09 | 62.01 |
| PGSC0003DMT400081474 | Potato | cytosol | 63.84 | 61.4 |
| GSMUA_Achr9P20170_001 | Banana | cytosol | 34.43 | 59.76 |
| Bra023381.1-P | Field mustard | nucleus | 45.33 | 55.74 |
| CDX85683 | Canola | nucleus | 45.67 | 55.35 |
| CDX91157 | Canola | nucleus | 45.5 | 55.25 |
| Bra008872.1-P | Field mustard | plastid | 48.27 | 53.65 |
| AT5G12900.1 | Thale cress | nucleus, plastid | 51.38 | 52.85 |
| CDY53973 | Canola | nucleus | 49.48 | 52.67 |
| CDY55867 | Canola | cytosol | 48.79 | 52.13 |
| Bra006167.1-P | Field mustard | plastid | 45.16 | 51.58 |
| GSMUA_Achr3P03800_001 | Banana | nucleus | 50.87 | 51.58 |
| GSMUA_Achr9P12540_001 | Banana | nucleus | 50.35 | 50.7 |
| GSMUA_Achr9P27740_001 | Banana | cytosol, nucleus, peroxisome | 50.87 | 50.52 |
| CDX70481 | Canola | cytosol | 46.02 | 49.26 |
| Os08t0508100-01 | Rice | plastid | 50.87 | 48.76 |
| TraesCS7D01G244400.1 | Wheat | plastid | 48.62 | 47.31 |
| TraesCS7A01G245900.1 | Wheat | plastid | 48.62 | 47.07 |
| TraesCS7B01G145600.1 | Wheat | plastid | 48.44 | 46.74 |
| EES14272 | Sorghum | plastid | 49.13 | 46.63 |
| GSMUA_Achr8P25600_001 | Banana | cytosol, nucleus, peroxisome | 51.21 | 46.54 |
| Zm00001d020937_P001 | Maize | plastid | 46.71 | 46.08 |
| Os09t0488800-01 | Rice | plastid | 48.62 | 45.91 |
| EER99087 | Sorghum | plastid | 46.71 | 45.76 |
| HORVU5Hr1G073320.1 | Barley | nucleus | 41.7 | 45.73 |
| Solyc01g014120.2.1 | Tomato | cytosol, nucleus | 26.99 | 45.35 |
| Zm00001d031444_P001 | Maize | plastid | 46.54 | 44.68 |
| Zm00001d052889_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 46.54 | 44.68 |
| Solyc01g014380.2.1 | Tomato | nucleus | 23.36 | 44.26 |
| Zm00001d006025_P001 | Maize | plastid | 45.85 | 43.66 |
| TraesCS5B01G264800.2 | Wheat | plastid | 46.89 | 43.57 |
| GSMUA_Achr7P02030_001 | Banana | cytosol | 47.4 | 43.29 |
| TraesCS5D01G273100.1 | Wheat | plastid | 46.02 | 43.18 |
| TraesCS5A01G265200.2 | Wheat | plastid | 46.37 | 42.88 |
| HORVU5Hr1G073290.4 | Barley | cytosol, nucleus, plastid | 46.02 | 41.43 |
| HORVU7Hr1G050500.2 | Barley | endoplasmic reticulum | 37.89 | 40.26 |
| KRH60459 | Soybean | nucleus | 26.3 | 34.47 |
| KRH41761 | Soybean | plastid | 26.47 | 31.03 |
Protein Annotations
| EMBL:ACUP02009121 | EnsemblPlants:KRH10167 | EnsemblPlantsGene:GLYMA_15G032100 | EntrezGene:100786740 | ncoils:Coil | PANTHER:PTHR31029 |
| PANTHER:PTHR31029:SF3 | ProteinID:KRH10167 | ProteinID:KRH10167.1 | SEG:seg | UniParc:UPI0001BA8175 | UniProt:I1MD87 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:2582122..2584618
Molecular Weight (calculated)
65747.8 Da
IEP (calculated)
7.829
GRAVY (calculated)
-0.570
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATATAKTN NDNNPEITRE EIQTAIAKAV ELRALHTALT QGSSPGTNNA RFPSPSPASH FSAQDYPVFT PSYEDEAHQN PTRSRTISES WDENGVEGRN
101: SMAPSDYKEK LNSRKELPFG FGNLDTHMCP ADDSKSVTGS CANHITFLQT SPAAVANDYF KSRRRNSLGD LKPLSSCNRC NPAVITSEYE STRNNKSSNI
201: VVPLTDSHVS FQTQPKSKGV ISWLFPRFKK KHKNVSSPSR TESEEVSQVL KDMGIVSVEA LKRELMEANE SRDTALMEVS EMRSSLGELK QKLEYLESYC
301: EELKKALRQA MLTKETTFSE KLNSPPQRGT PFDGNGENLM PVSEDVMVEG FLQIVSESRL SVKQFCKTLI CQIEETDHPL MDNLNLLLQP YRLSLNSKYS
401: KAVLYHFEAF INQSFYQDFE NSVFQKNGCT KFLDPRQDRQ AQFSSFVALR NLSWNEVLRK GTKYYSEEFS KFCDQKMSCI ITTLNWTRPW PEQLLQAFFV
501: AAKCIWLLHL LAFSFNPPLG ILRVEENRNF DPHYMEDLVT DRQRSQGPSR VKIMVVPGFY VQDRILRCRV ICRHKSAP
101: SMAPSDYKEK LNSRKELPFG FGNLDTHMCP ADDSKSVTGS CANHITFLQT SPAAVANDYF KSRRRNSLGD LKPLSSCNRC NPAVITSEYE STRNNKSSNI
201: VVPLTDSHVS FQTQPKSKGV ISWLFPRFKK KHKNVSSPSR TESEEVSQVL KDMGIVSVEA LKRELMEANE SRDTALMEVS EMRSSLGELK QKLEYLESYC
301: EELKKALRQA MLTKETTFSE KLNSPPQRGT PFDGNGENLM PVSEDVMVEG FLQIVSESRL SVKQFCKTLI CQIEETDHPL MDNLNLLLQP YRLSLNSKYS
401: KAVLYHFEAF INQSFYQDFE NSVFQKNGCT KFLDPRQDRQ AQFSSFVALR NLSWNEVLRK GTKYYSEEFS KFCDQKMSCI ITTLNWTRPW PEQLLQAFFV
501: AAKCIWLLHL LAFSFNPPLG ILRVEENRNF DPHYMEDLVT DRQRSQGPSR VKIMVVPGFY VQDRILRCRV ICRHKSAP
001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG
Arabidopsis Description
IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.