Factsheet for Zm00001d052889_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d029059_P001
Zm00001d038481_P001
Zm00001d043058_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G12900.1	Zm00001d029059_P001	AT3G56370.1	15618632
AT5G12900.1	Zm00001d038481_P001	AT3G56370.1	15618632
AT5G12900.1	Zm00001d043058_P001	AT3G56370.1	15618632

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14272	Sorghum	plastid	82.39	81.44
Zm00001d031444_P001	Maize	plastid	80.73	80.73
Os08t0508100-01	Rice	plastid	71.59	71.48
TraesCS7D01G244400.1	Wheat	plastid	66.45	67.34
TraesCS7A01G245900.1	Wheat	plastid	65.78	66.33
TraesCS7B01G145600.1	Wheat	plastid	65.45	65.78
HORVU7Hr1G050500.2	Barley	endoplasmic reticulum	55.32	61.21
Solyc01g014110.2.1	Tomato	endoplasmic reticulum, extracellular	7.48	59.21
GSMUA_Achr9P20170_001	Banana	cytosol	31.73	57.36
GSMUA_Achr9P27740_001	Banana	cytosol, nucleus, peroxisome	53.82	55.67
Zm00001d020937_P001	Maize	plastid	53.16	54.61
Zm00001d006025_P001	Maize	plastid	54.15	53.71
GSMUA_Achr3P03800_001	Banana	nucleus	50.0	52.81
GSMUA_Achr9P12540_001	Banana	nucleus	49.83	52.26
CDY67745	Canola	plastid	30.07	49.59
GSMUA_Achr8P25600_001	Banana	cytosol, nucleus, peroxisome	51.0	48.27
VIT_06s0004g01680.t01	Wine grape	cytosol	46.35	47.21
KRH10167	Soybean	nucleus	44.68	46.54
KRH29674	Soybean	cytosol	44.68	45.75
KRH24675	Soybean	nucleus	44.52	45.5
KRH23169	Soybean	nucleus, plastid	42.03	45.1
GSMUA_Achr7P02030_001	Banana	cytosol	47.34	45.02
Bra023381.1-P	Field mustard	nucleus	34.39	44.04
CDX85683	Canola	nucleus	34.55	43.61
Solyc01g006690.2.1	Tomato	nucleus	43.85	43.42
CDX91157	Canola	nucleus	34.05	43.07
PGSC0003DMT400055002	Potato	nucleus	43.69	42.69
Bra008872.1-P	Field mustard	plastid	36.38	42.12
PGSC0003DMT400081474	Potato	cytosol	42.03	42.1
CDY53973	Canola	nucleus	37.71	41.8
CDY55867	Canola	cytosol	37.54	41.77
Bra006167.1-P	Field mustard	plastid	35.05	41.7
AT5G12900.1	Thale cress	nucleus, plastid	38.54	41.28
CDX70481	Canola	cytosol	35.38	39.44
Solyc01g014120.2.1	Tomato	cytosol, nucleus	17.61	30.81
Solyc01g014380.2.1	Tomato	nucleus	14.12	27.87
Zm00001d028423_P001	Maize	plastid	18.77	26.28
Zm00001d047916_P001	Maize	plastid	18.11	25.41

Protein Annotations

EMBL:BT064260	EMBL:EU957229	EnsemblPlants:Zm00001d052889_P001	EnsemblPlants:Zm00001d052889_T001	EnsemblPlantsGene:Zm00001d052889	EntrezGene:100192884
ncoils:Coil	PANTHER:PTHR31029	PANTHER:PTHR31029:SF3	ProteinID:AQK58302.1	SEG:seg	UniParc:UPI000182D059
UniProt:B6SWW4	MapMan:35.1	:	:	:	:

Description

IRK-interacting protein

Coordinates

chr4:-:203544095..203547230

Molecular Weight (calculated)

66931.8 Da

IEP (calculated)

7.339

GRAVY (calculated)

-0.356

Length

602 amino acids

Sequence
(BLAST)

001: MAADATASPS SSYLPPPLPT SRLDIQAAVA EAAELRALHA ALLQGGGASN SGTYASASRS PAVIRLPPAL ARPAPLPTAA EDYPVFAPMY DEEPLGGTNC
101: IRQDNRSLSE NWSGVGLDHD GLEDDEVAFS DFDNHNTFSS SNSELHLSSS NEHLRNRRAC RNHPSFLQPT ALAADGLIRS TSRMTDLTEF KVVTTCNTCK
201: PATINRGDDA KSLKNLDCTV PLSNYHPTVA AFPRTRHKGP QHILSWLLPK SKRKPRPDVS PTTVECENMS QLLKDWGVFS LDSLKKEVVE ANEHRDAALQ
301: EVSEMKLSLG ELTTKIASLE AYCSELKKAL KQATSAKSMQ SHHSKRSSTR SVSGSPLPVS HEVMVEGFVQ VVSEARLSVK QFCKALIQQV EEDADNGLSE
401: KLNLLLQPYQ ITLGDRRPKL VLYHLEALMN QAMYQDFENC AFQKNGPRRC LDPRQERQES FASFVALRNL SWSEVLRKGT RHHCKELSRF CDQKMGCVAS
501: ALMNWSRPCW AEPLLQCFFV ACKCVWLLHL LAFSFSPPLA ILRVEEGRAF EQTYMEDVLL DMQRSQDHEP PPSARVKLMV VPGFYVQDRL LKCRVLCSYI
601: SG

Best Arabidopsis Sequence Match ( AT5G12900.1 )
(BLAST)

001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG

Arabidopsis Description

IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.