Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028423_P001 | Maize | plastid | 85.08 | 84.88 |
| TraesCS4D01G224300.1 | Wheat | peroxisome, plastid | 77.86 | 76.78 |
| TraesCS4A01G080000.2 | Wheat | peroxisome, plastid | 77.39 | 75.97 |
| KXG39773 | Sorghum | cytosol, nucleus, plastid | 77.16 | 75.4 |
| TraesCS4B01G224000.1 | Wheat | plastid | 75.52 | 73.14 |
| Os03t0249100-01 | Rice | plasma membrane | 74.59 | 71.91 |
| HORVU4Hr1G063050.1 | Barley | mitochondrion | 37.3 | 60.61 |
| CDY19343 | Canola | cytosol | 13.29 | 52.78 |
| GSMUA_Achr5P18790_001 | Banana | mitochondrion | 37.3 | 44.69 |
| GSMUA_Achr8P19390_001 | Banana | plastid | 40.56 | 43.72 |
| CDY21046 | Canola | nucleus, plastid | 37.76 | 36.57 |
| CDY31261 | Canola | nucleus, plastid | 38.46 | 34.52 |
| KRH60459 | Soybean | nucleus | 35.43 | 34.47 |
| CDX98071 | Canola | nucleus, plastid | 37.06 | 34.34 |
| AT1G12330.1 | Thale cress | nucleus | 38.46 | 32.67 |
| KRH41761 | Soybean | plastid | 37.53 | 32.66 |
| PGSC0003DMT400010099 | Potato | plastid | 35.9 | 32.29 |
| Solyc08g079510.2.1 | Tomato | plastid | 35.43 | 32.14 |
| VIT_02s0241g00060.t01 | Wine grape | plastid | 35.43 | 31.93 |
| CDY30072 | Canola | nucleus, plastid | 38.0 | 31.71 |
| Bra016777.1-P | Field mustard | nucleus, plastid | 36.36 | 31.52 |
| Bra019759.1-P | Field mustard | plastid | 37.3 | 31.43 |
| CDY53856 | Canola | cytosol, plastid | 20.75 | 28.16 |
| Bra028382.1-P | Field mustard | cytosol | 19.11 | 23.98 |
| Zm00001d006025_P001 | Maize | plastid | 28.67 | 20.26 |
| Zm00001d020937_P001 | Maize | plastid | 27.27 | 19.97 |
| Zm00001d031444_P001 | Maize | plastid | 25.64 | 18.27 |
| Zm00001d052889_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 25.41 | 18.11 |
Protein Annotations
| EMBL:BT042640 | EnsemblPlants:Zm00001d047916_P001 | EnsemblPlants:Zm00001d047916_T001 | EnsemblPlantsGene:Zm00001d047916 | EntrezGene:100274868 | ncoils:Coil |
| PANTHER:PTHR31029 | PANTHER:PTHR31029:SF4 | ProteinID:AQL08045.1 | SEG:seg | UniParc:UPI00017B7493 | UniProt:B4FZV2 |
| MapMan:35.1 | : | : | : | : | : |
Description
IRK-interacting protein
Coordinates
chr9:-:145292692..145294439
Molecular Weight (calculated)
45273.6 Da
IEP (calculated)
10.074
GRAVY (calculated)
-0.249
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSPSPPLP TAASEPKQQR GGTNAAPEKS DKKYAHVPTP LHHGHRCASK KAPRGGKGGD VADPAAYVAA VSCSDCRFKQ RALAPASPGA VIRSLFVSLT
101: RRSTPRSSPS ASGGAADAGD VEQWRLAAAD LSRRLAAATR TRDEALEDTT RLKHSLAELE LKLARLEARA LPAPAFPVDS FLRAVSTSRA AVRNLARALS
201: THLRSPSSQG PSLEGFLNRA FHADFELDTD AGVHTPDPAG RCQANLAAYH AVAVLTWEEV LLHGTKHYSE GLSRFCDAKM SEVVSSLGWA RARPWPEPLL
301: QAFFLAAKAV WGVRLLARSV HPPLPVVRAD RGARFDPRFM EDAAASRAGR LEPASVNMMV APGFHVYLAG AGVVKCRVVC FYSSNNGRTA GHRDGGSSAN
401: GSVGMGSSCS GMNGSATDVV DSCNSSRAG
101: RRSTPRSSPS ASGGAADAGD VEQWRLAAAD LSRRLAAATR TRDEALEDTT RLKHSLAELE LKLARLEARA LPAPAFPVDS FLRAVSTSRA AVRNLARALS
201: THLRSPSSQG PSLEGFLNRA FHADFELDTD AGVHTPDPAG RCQANLAAYH AVAVLTWEEV LLHGTKHYSE GLSRFCDAKM SEVVSSLGWA RARPWPEPLL
301: QAFFLAAKAV WGVRLLARSV HPPLPVVRAD RGARFDPRFM EDAAASRAGR LEPASVNMMV APGFHVYLAG AGVVKCRVVC FYSSNNGRTA GHRDGGSSAN
401: GSVGMGSSCS GMNGSATDVV DSCNSSRAG
001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
Arabidopsis Description
Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.