Factsheet for Zm00001d020937_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d029059_P001
Zm00001d038481_P001
Zm00001d043058_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G12900.1	Zm00001d029059_P001	AT3G56370.1	15618632
AT5G12900.1	Zm00001d038481_P001	AT3G56370.1	15618632
AT5G12900.1	Zm00001d043058_P001	AT3G56370.1	15618632

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99087	Sorghum	plastid	92.32	91.69
Zm00001d006025_P001	Maize	plastid	88.74	85.67
HORVU5Hr1G073320.1	Barley	nucleus	59.22	65.84
TraesCS5D01G273100.1	Wheat	plastid	69.11	65.75
Os09t0488800-01	Rice	plastid	68.6	65.69
TraesCS5B01G264800.2	Wheat	plastid	69.45	65.43
TraesCS5A01G265200.2	Wheat	plastid	69.11	64.8
HORVU5Hr1G073290.4	Barley	cytosol, nucleus, plastid	68.94	62.93
Solyc01g014110.2.1	Tomato	endoplasmic reticulum, extracellular	7.51	57.89
GSMUA_Achr9P20170_001	Banana	cytosol	32.76	57.66
Zm00001d031444_P001	Maize	plastid	58.7	57.14
Zm00001d052889_P001	Maize	cytosol, nucleus, peroxisome, plastid	54.61	53.16
GSMUA_Achr9P27740_001	Banana	cytosol, nucleus, peroxisome	51.88	52.23
GSMUA_Achr3P03800_001	Banana	nucleus	49.66	51.05
GSMUA_Achr9P12540_001	Banana	nucleus	49.15	50.17
CDY67745	Canola	plastid	30.2	48.49
VIT_06s0004g01680.t01	Wine grape	cytosol	47.78	47.38
GSMUA_Achr8P25600_001	Banana	cytosol, nucleus, peroxisome	51.19	47.17
KRH10167	Soybean	nucleus	46.08	46.71
KRH29674	Soybean	cytosol	45.22	45.07
KRH24675	Soybean	nucleus	45.22	44.99
KRH23169	Soybean	nucleus, plastid	43.0	44.92
CDX85683	Canola	nucleus	36.01	44.23
Bra023381.1-P	Field mustard	nucleus	35.32	44.04
Solyc01g006690.2.1	Tomato	nucleus	45.56	43.91
CDX91157	Canola	nucleus	35.67	43.91
PGSC0003DMT400081474	Potato	cytosol	44.88	43.76
PGSC0003DMT400055002	Potato	nucleus	45.9	43.67
GSMUA_Achr7P02030_001	Banana	cytosol	46.93	43.44
Bra006167.1-P	Field mustard	plastid	35.67	41.3
AT5G12900.1	Thale cress	nucleus, plastid	39.42	41.1
CDY53973	Canola	nucleus	37.88	40.88
Bra008872.1-P	Field mustard	plastid	36.01	40.58
CDX70481	Canola	cytosol	37.37	40.56
CDY55867	Canola	cytosol	37.2	40.3
Solyc01g014120.2.1	Tomato	cytosol, nucleus	17.24	29.36
Zm00001d028423_P001	Maize	plastid	20.14	27.44
Zm00001d047916_P001	Maize	plastid	19.97	27.27
Solyc01g014380.2.1	Tomato	nucleus	13.65	26.23

Protein Annotations

EMBL:BT053794	EnsemblPlants:Zm00001d020937_P001	EnsemblPlants:Zm00001d020937_T001	EnsemblPlantsGene:Zm00001d020937	EntrezGene:100279200	ncoils:Coil
PANTHER:PTHR31029	PANTHER:PTHR31029:SF5	ProteinID:ONM55836.1	SEG:seg	UniParc:UPI00019171C5	UniProt:B7ZWV2
MapMan:35.1	:	:	:	:	:

Description

IRK-interacting protein

Coordinates

chr7:-:137154591..137157038

Molecular Weight (calculated)

64237.4 Da

IEP (calculated)

8.472

GRAVY (calculated)

-0.303

Length

586 amino acids

Sequence
(BLAST)

001: MAVVAAGGEE AFAPAAPSTS GAPASRQDVQ AAIAKAVELR QLHAALIQRG APNARAASRS PAVIRLPPLA SPARSRAADE EYPVFTPAYD DEEHVAAVAP
101: NHICPDNRSR SENWTGVALD QGGSDDAALS DYDGLQAFSS SNSDVFFPSS NDHRLRNRGT AYKIHPAFMH SAPSADRFLP SAGRVAYTSE LNLPPATCGN
201: AFRPATISGT RVPPPSAHSR TKQGGPPQIL SWLFPKSRKK AKPPEMTSPT AIERGNMPQL LTEWGALSME SLKKELAEAN AHRDAALHEA AEVRSSLGEL
301: ATKLVSVEAY CSELKKALRQ ATNSPSVSRR PTKSIEPSRE LSMPVSHEVM VEGFLQIASE ARLSVKQLCK ALIQQVNEES SDGLSDKLNL LLRPYQLALS
401: SGSVSKHCSK AVLYHLEAIM NQVMFQDFEN PAFQRNGSPR CLDPAEDSRQ SFAAFVALRN LSWNEVLRKG TKYYSEDFSR FCDRKMSVVV ATLAWSRPWP
501: EQLLQCFFVA AKCVWLLHLL AFSFGPPLTI LRVQDGRAFD ELYMEDILHD RQPVQSPCQV KIMVTPGFYV QDRVLKCRVL KTRSAA

Best Arabidopsis Sequence Match ( AT5G12900.1 )
(BLAST)

001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG

Arabidopsis Description

IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.