Factsheet for Zm00001d006025_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d029059_P001
Zm00001d038481_P001
Zm00001d043058_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G12900.1	Zm00001d029059_P001	AT3G56370.1	15618632
AT5G12900.1	Zm00001d038481_P001	AT3G56370.1	15618632
AT5G12900.1	Zm00001d043058_P001	AT3G56370.1	15618632

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99087	Sorghum	plastid	89.46	92.03
Zm00001d020937_P001	Maize	plastid	85.67	88.74
HORVU5Hr1G073320.1	Barley	nucleus	57.0	65.65
Os09t0488800-01	Rice	plastid	66.06	65.52
TraesCS5D01G273100.1	Wheat	plastid	66.06	65.1
TraesCS5B01G264800.2	Wheat	plastid	66.56	64.95
TraesCS5A01G265200.2	Wheat	plastid	66.23	64.32
HORVU5Hr1G073290.4	Barley	cytosol, nucleus, plastid	66.72	63.08
Solyc01g014110.2.1	Tomato	endoplasmic reticulum, extracellular	7.25	57.89
GSMUA_Achr9P20170_001	Banana	cytosol	31.3	57.06
Zm00001d031444_P001	Maize	plastid	56.34	56.81
Zm00001d052889_P001	Maize	cytosol, nucleus, peroxisome, plastid	53.71	54.15
GSMUA_Achr9P27740_001	Banana	cytosol, nucleus, peroxisome	48.6	50.69
GSMUA_Achr3P03800_001	Banana	nucleus	46.62	49.65
GSMUA_Achr9P12540_001	Banana	nucleus	46.46	49.13
CDY67745	Canola	plastid	29.49	49.04
VIT_06s0004g01680.t01	Wine grape	cytosol	45.96	47.21
GSMUA_Achr8P25600_001	Banana	cytosol, nucleus, peroxisome	48.11	45.91
KRH10167	Soybean	nucleus	43.66	45.85
KRH24675	Soybean	nucleus	43.66	44.99
KRH29674	Soybean	cytosol	43.49	44.9
KRH23169	Soybean	nucleus, plastid	40.86	44.21
CDX85683	Canola	nucleus	34.43	43.82
Bra023381.1-P	Field mustard	nucleus	33.77	43.62
CDX91157	Canola	nucleus	34.1	43.49
PGSC0003DMT400055002	Potato	nucleus	43.66	43.02
PGSC0003DMT400081474	Potato	cytosol	42.5	42.93
Solyc01g006690.2.1	Tomato	nucleus	43.0	42.93
GSMUA_Achr7P02030_001	Banana	cytosol	43.66	41.86
AT5G12900.1	Thale cress	nucleus, plastid	38.55	41.64
Bra006167.1-P	Field mustard	plastid	34.43	41.3
CDY53973	Canola	nucleus	36.9	41.25
Bra008872.1-P	Field mustard	plastid	35.09	40.96
CDX70481	Canola	cytosol	36.08	40.56
CDY55867	Canola	cytosol	36.08	40.48
Solyc01g014120.2.1	Tomato	cytosol, nucleus	16.64	29.36
Zm00001d028423_P001	Maize	plastid	20.59	29.07
Zm00001d047916_P001	Maize	plastid	20.26	28.67
Solyc01g014380.2.1	Tomato	nucleus	13.01	25.9

Protein Annotations

EnsemblPlants:Zm00001d006025_P001	EnsemblPlants:Zm00001d006025_T001	EnsemblPlantsGene:Zm00001d006025	EntrezGene:100193579	ncoils:Coil	PANTHER:PTHR31029
PANTHER:PTHR31029:SF5	ProteinID:ONM22550.1	SEG:seg	UniParc:UPI000843A0D7	UniProt:A0A1D6ES37	MapMan:35.1

Description

IRK-interacting protein

Coordinates

chr2:-:195445740..195447994

Molecular Weight (calculated)

67513.5 Da

IEP (calculated)

9.126

GRAVY (calculated)

-0.348

Length

607 amino acids

Sequence
(BLAST)

001: MAVVAAGAEA FDPAAPSPPR APASRQDVQA AIAKAVELRQ LRATLLQRGA PNARARACAS RSPAVIRLPP VASPTRSRAA DEEYPVFTPA YDDEERVATV
101: ALNHICQDNR SRSENWTGVA LDHDDAALSD YDGLHAFSSS NSEVLLPYSN DHRIRNRGTV YKIHPAFMHS APSADRFLPP TGRAAYTTEF KLPPATCGNA
201: FRPTTISSTR VPLPPQSAHS RTKQRGPPQI LSWLFPKSRK KAKPPEMASP TAIERGNMPQ LLTEWGALSL ESLKKELAEA NAHRDAALRE AAEVRSSLGE
301: LATKLVSVEA YCSELKKALR QATNSPSVSR RSTRSVEARR ELPTPVSHEV MVEGFLQIAS EARLSVKQLC KALIQQGNEE SCDGLSDRLN LLLRPYQLAL
401: SGSTGKHCSK ATLYHLEAIM NQAMFQDFEN PAFQRNGSPR CLDPAEDRQQ SFAAFVALRN LSWNEVLRKG TKYYSEDFSR FCDRKMSGVV ATLGWSRPWP
501: EQLLQSFFVA TKCVWLLHLL AFSFGPPLTI LRIQDGRAFD EMYMEDILHD RQQVQGPCQV KIMVMPGFYV QDRVLKCRVL TTRSAAAFFD QQLVWCQLPR
601: VTSFFLS

Best Arabidopsis Sequence Match ( AT5G12900.1 )
(BLAST)

001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG

Arabidopsis Description

IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.