Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047916_P001 | Maize | plastid | 84.88 | 85.08 |
| TraesCS4D01G224300.1 | Wheat | peroxisome, plastid | 79.3 | 78.39 |
| TraesCS4A01G080000.2 | Wheat | peroxisome, plastid | 78.37 | 77.12 |
| KXG39773 | Sorghum | cytosol, nucleus, plastid | 76.74 | 75.17 |
| Os03t0249100-01 | Rice | plasma membrane | 77.21 | 74.61 |
| TraesCS4B01G224000.1 | Wheat | plastid | 76.28 | 74.04 |
| HORVU4Hr1G063050.1 | Barley | mitochondrion | 36.74 | 59.85 |
| CDY19343 | Canola | cytosol | 13.49 | 53.7 |
| GSMUA_Achr5P18790_001 | Banana | mitochondrion | 37.44 | 44.97 |
| GSMUA_Achr8P19390_001 | Banana | plastid | 40.7 | 43.97 |
| CDY21046 | Canola | nucleus, plastid | 36.74 | 35.67 |
| CDX98071 | Canola | nucleus, plastid | 37.91 | 35.21 |
| KRH60459 | Soybean | nucleus | 35.35 | 34.47 |
| VIT_02s0241g00060.t01 | Wine grape | plastid | 36.28 | 32.77 |
| KRH41761 | Soybean | plastid | 37.44 | 32.66 |
| CDY31261 | Canola | nucleus, plastid | 36.28 | 32.64 |
| AT1G12330.1 | Thale cress | nucleus | 38.14 | 32.48 |
| Bra019759.1-P | Field mustard | plastid | 38.14 | 32.22 |
| CDY30072 | Canola | nucleus, plastid | 37.91 | 31.71 |
| PGSC0003DMT400010099 | Potato | plastid | 34.88 | 31.45 |
| Solyc08g079510.2.1 | Tomato | plastid | 34.42 | 31.29 |
| Bra016777.1-P | Field mustard | nucleus, plastid | 35.81 | 31.11 |
| CDY53856 | Canola | cytosol, plastid | 20.7 | 28.16 |
| Bra028382.1-P | Field mustard | cytosol | 18.84 | 23.68 |
| Zm00001d006025_P001 | Maize | plastid | 29.07 | 20.59 |
| Zm00001d020937_P001 | Maize | plastid | 27.44 | 20.14 |
| Zm00001d031444_P001 | Maize | plastid | 26.51 | 18.94 |
| Zm00001d052889_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 26.28 | 18.77 |
Protein Annotations
| EnsemblPlants:Zm00001d028423_P001 | EnsemblPlants:Zm00001d028423_T001 | EnsemblPlantsGene:Zm00001d028423 | ncoils:Coil | PANTHER:PTHR31029 | PANTHER:PTHR31029:SF4 |
| ProteinID:ONL95969.1 | SEG:seg | UniParc:UPI000221D674 | UniProt:A0A1D6JW24 | MapMan:35.1 | : |
Description
IRK-interacting protein
Coordinates
chr1:+:34540138..34541979
Molecular Weight (calculated)
45396.6 Da
IEP (calculated)
10.034
GRAVY (calculated)
-0.254
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSPSPPLP TGASEPKQQR GGTKAAPEKA DKKYAHVPTP LHHGHGGASN KTTPRGAKDA AGPAAYVAAV SFSDCRFKQR ALAPASPGAV IRSLFVSLTR
101: RSTPRSSPSA TPASAGADAG DGEQWRLAAA DLSRRLAAAT RTRDEALEET TRLKHSLAEL EHKLARLEAR VLPTPAAAFP VDSFLRAVST ARAAVRNLAR
201: ALSAHLRSPS SPGPSLESFL NRAFHADFEL DTDADAHTTD PAGRCQANLA AYHAVAVLTW EEVLLHGTKH YSEGLSRFCD AKMSEVVSSL GWARARPWPE
301: PLLQAFFLAA KGVWGVRLLA RSVHPPLPVV RAERGARFDP RFMEDAAASR AGTLEPASVK MMMAPGFHVY LAGAGVVKCR VVCFYTSSNA RTDGHRDGGS
401: SANGSVGLGS SCSDINGSAT DVVDSCRAVK
101: RSTPRSSPSA TPASAGADAG DGEQWRLAAA DLSRRLAAAT RTRDEALEET TRLKHSLAEL EHKLARLEAR VLPTPAAAFP VDSFLRAVST ARAAVRNLAR
201: ALSAHLRSPS SPGPSLESFL NRAFHADFEL DTDADAHTTD PAGRCQANLA AYHAVAVLTW EEVLLHGTKH YSEGLSRFCD AKMSEVVSSL GWARARPWPE
301: PLLQAFFLAA KGVWGVRLLA RSVHPPLPVV RAERGARFDP RFMEDAAASR AGTLEPASVK MMMAPGFHVY LAGAGVVKCR VVCFYTSSNA RTDGHRDGGS
401: SANGSVGLGS SCSDINGSAT DVVDSCRAVK
001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
Arabidopsis Description
Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.