Factsheet for HORVU4Hr1G063050.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G224300.1	Wheat	peroxisome, plastid	79.55	48.28
TraesCS4B01G224000.1	Wheat	plastid	79.55	47.4
TraesCS4A01G080000.2	Wheat	peroxisome, plastid	76.89	46.45
Zm00001d047916_P001	Maize	plastid	60.61	37.3
Zm00001d028423_P001	Maize	plastid	59.85	36.74
Os03t0249100-01	Rice	plasma membrane	60.23	35.73
KXG39773	Sorghum	cytosol, nucleus, plastid	59.09	35.54
GSMUA_Achr8P19390_001	Banana	plastid	26.14	17.34
GSMUA_Achr5P18790_001	Banana	mitochondrion	23.48	17.32
CDY21046	Canola	nucleus, plastid	26.89	16.03
CDY19343	Canola	cytosol	6.44	15.74
CDX98071	Canola	nucleus, plastid	26.52	15.12
CDY31261	Canola	nucleus, plastid	26.89	14.85
KRH60459	Soybean	nucleus	24.24	14.51
AT1G12330.1	Thale cress	nucleus	27.65	14.46
Bra016777.1-P	Field mustard	nucleus, plastid	26.89	14.34
KRH41761	Soybean	plastid	26.52	14.2
CDY30072	Canola	nucleus, plastid	26.89	13.81
Bra019759.1-P	Field mustard	plastid	26.52	13.75
VIT_02s0241g00060.t01	Wine grape	plastid	24.24	13.45
PGSC0003DMT400010099	Potato	plastid	22.35	12.37
Solyc08g079510.2.1	Tomato	plastid	21.59	12.05
CDY53856	Canola	cytosol, plastid	11.36	9.49
Bra028382.1-P	Field mustard	cytosol	11.36	8.77
HORVU5Hr1G073320.1	Barley	nucleus	17.42	8.73
HORVU5Hr1G073290.4	Barley	cytosol, nucleus, plastid	19.32	7.94
HORVU7Hr1G050500.2	Barley	endoplasmic reticulum	8.33	4.04

Protein Annotations

EnsemblPlants:HORVU4Hr1G063050.1	EnsemblPlantsGene:HORVU4Hr1G063050	PANTHER:PTHR31029	PANTHER:PTHR31029:SF4	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI000B460403	UniProt:A0A287PBP5	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:527533350..527534636

Molecular Weight (calculated)

27414.5 Da

IEP (calculated)

10.368

GRAVY (calculated)

-0.250

Length

264 amino acids

Sequence
(BLAST)

001: MYASVRRVGS WMLLSCLLAC FRAAMLSGNH QVSETKRHAG VATTASEKLD QKYAHSATPL HGHGGGGGAK KTPRRGRSEG GAADSAAYVA AVSCSDCRFK
101: QRALAPASPG AVIRSLFVSL TRRSTPRSSP SPTSASEGDA GEGEQWRLAA ADLSRRLAHP PLPVVRVDRG ARFDSRFMED AAASRAGRLE PASVKMMVAP
201: GFHVYVAGAG VVKCKVVCFY NNSRTGSHII GGSSANGGEG LGSSCTDMNG GGTDAVKSCQ SSRV

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.