Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30072 | Canola | nucleus, plastid | 84.36 | 82.88 |
| Bra019759.1-P | Field mustard | plastid | 83.17 | 82.51 |
| CDX98071 | Canola | nucleus, plastid | 75.45 | 82.29 |
| CDY19343 | Canola | cytosol | 17.43 | 81.48 |
| CDY31261 | Canola | nucleus, plastid | 76.04 | 80.33 |
| CDY21046 | Canola | nucleus, plastid | 68.91 | 78.56 |
| Bra016777.1-P | Field mustard | nucleus, plastid | 76.63 | 78.18 |
| CDY53856 | Canola | cytosol, plastid | 37.43 | 59.81 |
| VIT_02s0241g00060.t01 | Wine grape | plastid | 51.49 | 54.62 |
| KRH60459 | Soybean | nucleus | 46.34 | 53.06 |
| Bra028382.1-P | Field mustard | cytosol | 34.85 | 51.46 |
| KRH41761 | Soybean | plastid | 49.51 | 50.71 |
| PGSC0003DMT400010099 | Potato | plastid | 46.73 | 49.48 |
| Solyc08g079510.2.1 | Tomato | plastid | 45.74 | 48.84 |
| TraesCS4D01G224300.1 | Wheat | peroxisome, plastid | 33.66 | 39.08 |
| TraesCS4A01G080000.2 | Wheat | peroxisome, plastid | 33.47 | 38.67 |
| Zm00001d047916_P001 | Maize | plastid | 32.67 | 38.46 |
| Zm00001d028423_P001 | Maize | plastid | 32.48 | 38.14 |
| GSMUA_Achr5P18790_001 | Banana | mitochondrion | 26.93 | 37.99 |
| TraesCS4B01G224000.1 | Wheat | plastid | 33.07 | 37.7 |
| Os03t0249100-01 | Rice | plasma membrane | 33.07 | 37.53 |
| GSMUA_Achr8P19390_001 | Banana | plastid | 29.31 | 37.19 |
| KXG39773 | Sorghum | cytosol, nucleus, plastid | 31.09 | 35.76 |
| HORVU4Hr1G063050.1 | Barley | mitochondrion | 14.46 | 27.65 |
| AT5G12900.1 | Thale cress | nucleus, plastid | 29.11 | 26.16 |
Protein Annotations
| MapMan:35.1 | EntrezGene:837787 | UniProt:A0A178W7W2 | ProteinID:AAF79630.1 | ProteinID:AEE28867.1 | ArrayExpress:AT1G12330 |
| EnsemblPlantsGene:AT1G12330 | RefSeq:AT1G12330 | TAIR:AT1G12330 | RefSeq:AT1G12330-TAIR-G | EnsemblPlants:AT1G12330.1 | TAIR:AT1G12330.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | RefSeq:NP_172697.2 | ProteinID:OAP14539.1 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31029 | PANTHER:PTHR31029:SF4 | UniProt:Q9LNB2 |
| UniParc:UPI000009EED5 | SEG:seg | : | : | : | : |
Description
Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
Coordinates
chr1:+:4194420..4196749
Molecular Weight (calculated)
56822.0 Da
IEP (calculated)
8.428
GRAVY (calculated)
-0.620
Length
505 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.