Factsheet for Bra028382.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53856	Canola	cytosol, plastid	77.49	83.86
Bra019759.1-P	Field mustard	plastid	52.63	35.36
AT1G12330.1	Thale cress	nucleus	51.46	34.85
Bra016777.1-P	Field mustard	nucleus, plastid	47.66	32.93
KRH60459	Soybean	nucleus	38.6	29.93
VIT_02s0241g00060.t01	Wine grape	plastid	38.89	27.94
KRH41761	Soybean	plastid	38.3	26.57
PGSC0003DMT400010099	Potato	plastid	33.92	24.32
Solyc08g079510.2.1	Tomato	plastid	33.33	24.1
GSMUA_Achr5P18790_001	Banana	mitochondrion	23.39	22.35
GSMUA_Achr8P19390_001	Banana	plastid	23.98	20.6
Zm00001d047916_P001	Maize	plastid	23.98	19.11
Bra023381.1-P	Field mustard	nucleus	26.02	18.94
TraesCS4D01G224300.1	Wheat	peroxisome, plastid	23.98	18.85
Zm00001d028423_P001	Maize	plastid	23.68	18.84
TraesCS4A01G080000.2	Wheat	peroxisome, plastid	23.98	18.76
Os03t0249100-01	Rice	plasma membrane	24.27	18.65
KXG39773	Sorghum	cytosol, nucleus, plastid	23.68	18.45
TraesCS4B01G224000.1	Wheat	plastid	23.68	18.28
Bra006167.1-P	Field mustard	plastid	25.73	17.39
Bra008872.1-P	Field mustard	plastid	26.02	17.12
HORVU4Hr1G063050.1	Barley	mitochondrion	8.77	11.36

Protein Annotations

EnsemblPlants:Bra028382.1	EnsemblPlants:Bra028382.1-P	EnsemblPlantsGene:Bra028382	PANTHER:PTHR31029	PANTHER:PTHR31029:SF4	SEG:seg
UniParc:UPI00025453D5	UniProt:M4EHW7	MapMan:35.1	:	:	:

Description

AT1G12330 (E=2e-049) | unknown protein

Coordinates

chrA01:+:17915638..17916901

Molecular Weight (calculated)

38889.1 Da

IEP (calculated)

8.476

GRAVY (calculated)

-0.574

Length

342 amino acids

Sequence
(BLAST)

001: MTPTTNTEEQ SPATSVVLTT LTATILHRAS RKPQQQPFLH LKPQPQNQIH LPIGEAPNPL PPLPFRRGLP PPPPPSQTLP EKSSGAREEA QQARDLLPQP
101: QIGSRRVQQQ QQETERPCSV QRWDHPAVPR LGVGISLFDQ SPEQSSRIAD SQLRTVSGKV YERLSLLPQP FDVKINYFAK NPKSMIFYLE AILSRAFFEN
201: FELRSFRVSE NGSTRILNPS DRCESNYASF NVLMELTWDE VLSRGTKHFS EEFSRFCDRE NECHAFFGAS KSVWLVHLLA NSLNPGLQIF RVERDDHFDP
301: VYKEETGGDR YKSVVRAMVQ PGFYVYGSVV KCKVFCKRCG SD

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.