Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g079510.2.1 | Tomato | plastid | 91.82 | 92.6 |
| CDY19343 | Canola | cytosol | 14.47 | 63.89 |
| VIT_02s0241g00060.t01 | Wine grape | plastid | 58.07 | 58.19 |
| KRH60459 | Soybean | nucleus | 53.25 | 57.6 |
| KRH41761 | Soybean | plastid | 55.56 | 53.75 |
| CDY31261 | Canola | nucleus, plastid | 49.9 | 49.79 |
| CDY21046 | Canola | nucleus, plastid | 44.23 | 47.63 |
| Bra016777.1-P | Field mustard | nucleus, plastid | 49.06 | 47.27 |
| AT1G12330.1 | Thale cress | nucleus | 49.48 | 46.73 |
| CDX98071 | Canola | nucleus, plastid | 44.86 | 46.22 |
| CDY30072 | Canola | nucleus, plastid | 49.06 | 45.53 |
| Bra019759.1-P | Field mustard | plastid | 48.43 | 45.38 |
| CDY53856 | Canola | cytosol, plastid | 27.88 | 42.09 |
| GSMUA_Achr8P19390_001 | Banana | plastid | 33.96 | 40.7 |
| GSMUA_Achr5P18790_001 | Banana | mitochondrion | 29.98 | 39.94 |
| TraesCS4A01G080000.2 | Wheat | peroxisome, plastid | 33.33 | 36.38 |
| TraesCS4D01G224300.1 | Wheat | peroxisome, plastid | 33.12 | 36.32 |
| Os03t0249100-01 | Rice | plasma membrane | 33.54 | 35.96 |
| Zm00001d047916_P001 | Maize | plastid | 32.29 | 35.9 |
| TraesCS4B01G224000.1 | Wheat | plastid | 32.91 | 35.44 |
| Zm00001d028423_P001 | Maize | plastid | 31.45 | 34.88 |
| Bra028382.1-P | Field mustard | cytosol | 24.32 | 33.92 |
| KXG39773 | Sorghum | cytosol, nucleus, plastid | 30.61 | 33.26 |
| PGSC0003DMT400055002 | Potato | nucleus | 32.08 | 24.84 |
| PGSC0003DMT400081474 | Potato | cytosol | 31.24 | 24.79 |
| HORVU4Hr1G063050.1 | Barley | mitochondrion | 12.37 | 22.35 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400010099 | EnsemblPlantsGene:PGSC0003DMG400003956 | EntrezGene:102578950 | PANTHER:PTHR31029 | PANTHER:PTHR31029:SF4 | PGSC:PGSC0003DMG400003956 |
| RefSeq:XP_006363729.1 | SEG:seg | UniParc:UPI0002961A9D | UniProt:M0ZXH0 | MapMan:35.1 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400003956]
Coordinates
chr8:+:53194841..53197027
Molecular Weight (calculated)
54090.9 Da
IEP (calculated)
9.009
GRAVY (calculated)
-0.459
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSSSSSSK SSTSPRHPPL FTPIEEGNEE EDYSQGRSSF RAETTPSEAE YRHHPTPLHS ETENKGKVCN KKRQENDDKG VLCNKCRPSN REKITVVPLD
101: NKGNSVNSPH GGIFKSVLSN LVKKSPRLSL SSSEVESSVV GGVSTREEQW KIALAEVSHK LIQATRKRDE AVLEASRLKF SMVELEKKLN KLEIYCHNLK
201: SGLEVCSNNV MTNKSPLSLV QRVKFGEEDK VIEHFLVMVS EARSSVRILS RSMTLQLRQI GSKVYDRIAL LLQPYEIKIS ISRNPRGLLV YLEALLNKAF
301: YDDFESIGYQ KSSCNQILNP IDRCESNFGL YNRLKDLTWE EVLSKGTRFY SEEFSKFCDR KMSEIVAMLG WNRAWPEPLL QAFFGASKAV WLVHLLANSL
401: HPTLPIFRVD KEMKFDSIYM EDMGADKAKK LVPNMVRIMV TPGFYVYDNV VKCKVLCRYN NNIGINNNEG LITPSPT
101: NKGNSVNSPH GGIFKSVLSN LVKKSPRLSL SSSEVESSVV GGVSTREEQW KIALAEVSHK LIQATRKRDE AVLEASRLKF SMVELEKKLN KLEIYCHNLK
201: SGLEVCSNNV MTNKSPLSLV QRVKFGEEDK VIEHFLVMVS EARSSVRILS RSMTLQLRQI GSKVYDRIAL LLQPYEIKIS ISRNPRGLLV YLEALLNKAF
301: YDDFESIGYQ KSSCNQILNP IDRCESNFGL YNRLKDLTWE EVLSKGTRFY SEEFSKFCDR KMSEIVAMLG WNRAWPEPLL QAFFGASKAV WLVHLLANSL
401: HPTLPIFRVD KEMKFDSIYM EDMGADKAKK LVPNMVRIMV TPGFYVYDNV VKCKVLCRYN NNIGINNNEG LITPSPT
001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
Arabidopsis Description
Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.