CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60459	Soybean	nucleus	69.78	78.0
CDY19343	Canola	cytosol	14.81	67.59
VIT_02s0241g00060.t01	Wine grape	plastid	57.81	59.87
PGSC0003DMT400010099	Potato	plastid	53.75	55.56
Solyc08g079510.2.1	Tomato	plastid	52.74	54.97
CDY21046	Canola	nucleus, plastid	45.23	50.34
CDY31261	Canola	nucleus, plastid	48.48	50.0
CDY30072	Canola	nucleus, plastid	51.72	49.61
AT1G12330.1	Thale cress	nucleus	50.71	49.51
CDX98071	Canola	nucleus, plastid	46.45	49.46
Bra019759.1-P	Field mustard	plastid	50.71	49.12
Bra016777.1-P	Field mustard	nucleus, plastid	49.09	48.89
CDY53856	Canola	cytosol, plastid	28.6	44.62
GSMUA_Achr8P19390_001	Banana	plastid	34.28	42.46
GSMUA_Achr5P18790_001	Banana	mitochondrion	30.43	41.9
Bra028382.1-P	Field mustard	cytosol	26.57	38.3
Zm00001d047916_P001	Maize	plastid	32.66	37.53
TraesCS4D01G224300.1	Wheat	peroxisome, plastid	33.06	37.47
Zm00001d028423_P001	Maize	plastid	32.66	37.44
TraesCS4A01G080000.2	Wheat	peroxisome, plastid	33.06	37.3
KXG39773	Sorghum	cytosol, nucleus, plastid	32.45	36.45
TraesCS4B01G224000.1	Wheat	plastid	32.66	36.34
Os03t0249100-01	Rice	plasma membrane	32.25	35.73
KRH23169	Soybean	nucleus, plastid	30.22	26.56
HORVU4Hr1G063050.1	Barley	mitochondrion	14.2	26.52
KRH24675	Soybean	nucleus	31.64	26.49
KRH10167	Soybean	nucleus	31.03	26.47
KRH29674	Soybean	cytosol	31.24	26.19

Protein Annotations

EMBL:ACUP02004779	EnsemblPlants:KRH41761	EnsemblPlantsGene:GLYMA_08G049200	EntrezGene:100789428	ncoils:Coil	PANTHER:PTHR31029
PANTHER:PTHR31029:SF4	ProteinID:KRH41761	ProteinID:KRH41761.1	SEG:seg	UniParc:UPI000295154F	UniProt:K7L508
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:3835085..3841604

Molecular Weight (calculated)

55966.8 Da

IEP (calculated)

9.505

GRAVY (calculated)

-0.468

Length

493 amino acids

Sequence
(BLAST)

001: MSHLIYWTTS FSFSFLTHKS HFISPNPQMA SSSRHSPQFT PILEEREFDD LSGHDIISHS RSSHPPTPIV HKHTKSNHNN HKKKRSDSEE DGSVSCNKCR
101: PHSRDKIFIL PLDHSSTNNS HKPSSLLASP NGIFRSLVSK LTRKSPMSSS SSQDPLPPSR EEQWKMAVAE LSHKLLHATR KRDEALLEAS RLMHSMSELE
201: KKLNKLELYC HTLKSGLEQC TNNNITTSPT SLFKSQTLEQ DTVIQHFLVS VSEARSSVRL LSRSLTMQLR HMGSKVYEKV SFLLQPYDIK ISFSKSPTRS
301: LLFYLEALLN RTFYEDFETI GFQKNACNMI LNPKERCEAS YESFNMVHGL TWEEVLSKGT RHFSEEFSRF CDRKMSEIVA MLGWNRAWPE ALLQAFFGAS
401: KSVWKVHLLA NSLHPSLPIF RVEKGVRFDS VYMEDMGGGG GDKATSNLVP ALVRIMLAPG FYVYGSAVKC KVLCRYLSTS SNKEDKPLTP TPS

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.