CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53856	Canola	cytosol, plastid	92.59	31.65
CDX98071	Canola	nucleus, plastid	84.26	19.65
CDY21046	Canola	nucleus, plastid	80.56	19.64
CDY31261	Canola	nucleus, plastid	78.7	17.78
CDY30072	Canola	nucleus, plastid	84.26	17.7
AT1G12330.1	Thale cress	nucleus	81.48	17.43
KRH60459	Soybean	nucleus	64.81	15.87
KRH41761	Soybean	plastid	67.59	14.81
GSMUA_Achr5P18790_001	Banana	mitochondrion	48.15	14.53
PGSC0003DMT400010099	Potato	plastid	63.89	14.47
VIT_02s0241g00060.t01	Wine grape	plastid	62.96	14.29
Solyc08g079510.2.1	Tomato	plastid	62.04	14.16
CDY67745	Canola	plastid	47.22	13.97
Zm00001d028423_P001	Maize	plastid	53.7	13.49
Zm00001d047916_P001	Maize	plastid	52.78	13.29
Os03t0249100-01	Rice	plasma membrane	54.63	13.26
KXG39773	Sorghum	cytosol, nucleus, plastid	53.7	13.21
TraesCS4D01G224300.1	Wheat	peroxisome, plastid	52.78	13.1
TraesCS4A01G080000.2	Wheat	peroxisome, plastid	52.78	13.04
TraesCS4B01G224000.1	Wheat	plastid	52.78	12.87
GSMUA_Achr8P19390_001	Banana	plastid	47.22	12.81
CDX91157	Canola	nucleus	48.15	10.92
CDX85683	Canola	nucleus	48.15	10.9
CDY53973	Canola	nucleus	48.15	9.58
CDX70481	Canola	cytosol	47.22	9.44
CDY55867	Canola	cytosol	47.22	9.43
HORVU4Hr1G063050.1	Barley	mitochondrion	15.74	6.44

Protein Annotations

EnsemblPlants:CDY19343	EnsemblPlantsGene:GSBRNA2T00008871001	PANTHER:PTHR31029	ProteinID:CDY19343	ProteinID:CDY19343.1	SEG:seg
UniParc:UPI0004EF3AF5	UniProt:A0A078G3Q7	MapMan:35.1	:	:	:

Description

BnaC05g08520DBnaC05g08520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3Q7]

Coordinates

chrLK032095:-:164768..165232

Molecular Weight (calculated)

12513.9 Da

IEP (calculated)

7.373

GRAVY (calculated)

-0.347

Length

108 amino acids

Sequence
(BLAST)

001: MELTWDEVLS RGTKHFSEQF SRFCDRKNEC HVASMLCWNR AWPEPLLQAF FGASKSVWLV HLLANSLNPG LQIFRVERDD RFYPVYKEET GGDSVVKCKV
101: VCKHCGSD

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.