Factsheet for TraesCS4B01G224000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G224300.1	Wheat	peroxisome, plastid	92.33	94.02
TraesCS4A01G080000.2	Wheat	peroxisome, plastid	91.42	92.68
HORVU4Hr1G063050.1	Barley	mitochondrion	47.4	79.55
Zm00001d028423_P001	Maize	plastid	74.04	76.28
Os03t0249100-01	Rice	plasma membrane	76.07	75.73
Zm00001d047916_P001	Maize	plastid	73.14	75.52
KXG39773	Sorghum	cytosol, nucleus, plastid	70.2	70.84
CDY19343	Canola	cytosol	12.87	52.78
GSMUA_Achr5P18790_001	Banana	mitochondrion	36.12	44.69
GSMUA_Achr8P19390_001	Banana	plastid	39.73	44.22
CDY21046	Canola	nucleus, plastid	37.47	37.47
CDX98071	Canola	nucleus, plastid	37.02	35.42
CDY31261	Canola	nucleus, plastid	37.47	34.73
KRH60459	Soybean	nucleus	34.09	34.24
VIT_02s0241g00060.t01	Wine grape	plastid	35.67	33.19
AT1G12330.1	Thale cress	nucleus	37.7	33.07
PGSC0003DMT400010099	Potato	plastid	35.44	32.91
Solyc08g079510.2.1	Tomato	plastid	34.99	32.77
Bra016777.1-P	Field mustard	nucleus, plastid	36.57	32.73
KRH41761	Soybean	plastid	36.34	32.66
CDY30072	Canola	nucleus, plastid	37.7	32.49
Bra019759.1-P	Field mustard	plastid	37.25	32.42
CDY53856	Canola	cytosol, plastid	20.77	29.11
Bra028382.1-P	Field mustard	cytosol	18.28	23.68
TraesCS5B01G264800.2	Wheat	plastid	27.77	19.77
TraesCS7B01G145600.1	Wheat	plastid	25.96	19.2

Protein Annotations

EnsemblPlants:TraesCS4B01G224000.1	EnsemblPlantsGene:TraesCS4B01G224000	ncoils:Coil	PANTHER:PTHR31029	PANTHER:PTHR31029:SF4	SEG:seg
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:468454163..468455586

Molecular Weight (calculated)

46799.1 Da

IEP (calculated)

9.661

GRAVY (calculated)

-0.265

Length

443 amino acids

Sequence
(BLAST)

001: MVSSPSPSPP TFTSAVSSRP FSSSCDVSET KRHAGAPTTA SEKLDQKYAH SATPLHGHGG AKKTPRRGRS EGGAADSAAY VAAVSCSDCR FKQRALAPAS
101: PGAVIRSLFV SLTRRSTPRS SPSPTSASEG DGGEGEQWRL AAADLSRRLA AATRTRDDAV EETSRLKQSL AELELKLARL EARVLPTPAA AVFPVESFLR
201: AVSTARATVR NLTRALSTHL RSPASPGPNL ESFLNRAFHA DFELDTEGDV HTADPAGRCE ANLAAYHAVA ALTWEEVLIH GTKHYSDGLS RFCDAKMSEV
301: VSSLGWARAR PWPEPLLQAF FLAAKGVWGV RLLARSVHPP LPVVRVDRGA RFDSRFMEDA AASRAGRLEP ASVKMMVAPG FHVYVAGAGV VKCKVVCFYN
401: NSRTGSHIIG GSSANGGEGL GGSCSDMNGG GTDSVKSCQS SRV

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.