Factsheet for TraesCS4A01G080000.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G224300.1	Wheat	peroxisome, plastid	97.71	98.16
TraesCS4B01G224000.1	Wheat	plastid	92.68	91.42
Zm00001d028423_P001	Maize	plastid	77.12	78.37
Os03t0249100-01	Rice	plasma membrane	79.18	77.75
Zm00001d047916_P001	Maize	plastid	75.97	77.39
HORVU4Hr1G063050.1	Barley	mitochondrion	46.45	76.89
KXG39773	Sorghum	cytosol, nucleus, plastid	72.08	71.75
CDY19343	Canola	cytosol	13.04	52.78
GSMUA_Achr5P18790_001	Banana	mitochondrion	37.3	45.53
GSMUA_Achr8P19390_001	Banana	plastid	40.27	44.22
CDY21046	Canola	nucleus, plastid	38.44	37.92
CDX98071	Canola	nucleus, plastid	37.3	35.21
CDY31261	Canola	nucleus, plastid	37.99	34.73
KRH60459	Soybean	nucleus	35.01	34.69
AT1G12330.1	Thale cress	nucleus	38.67	33.47
PGSC0003DMT400010099	Potato	plastid	36.38	33.33
VIT_02s0241g00060.t01	Wine grape	plastid	36.16	33.19
Solyc08g079510.2.1	Tomato	plastid	35.93	33.19
KRH41761	Soybean	plastid	37.3	33.06
Bra016777.1-P	Field mustard	nucleus, plastid	36.84	32.53
CDY30072	Canola	nucleus, plastid	38.22	32.49
Bra019759.1-P	Field mustard	plastid	37.53	32.22
CDY53856	Canola	cytosol, plastid	21.05	29.11
Bra028382.1-P	Field mustard	cytosol	18.76	23.98
TraesCS5A01G265200.2	Wheat	plastid	28.38	19.84
TraesCS7A01G245900.1	Wheat	plastid	25.86	18.93

Protein Annotations

EnsemblPlants:TraesCS4A01G080000.2	EnsemblPlantsGene:TraesCS4A01G080000	ncoils:Coil	PANTHER:PTHR31029	PANTHER:PTHR31029:SF4	SEG:seg
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:82404466..82405870

Molecular Weight (calculated)

45853.1 Da

IEP (calculated)

9.801

GRAVY (calculated)

-0.279

Length

437 amino acids

Sequence
(BLAST)

001: MVSSPSPSPP TFTSAVSETK RHGGVPTTAS EKLDQKYAHS ATPLHGHGHG GGGGAKKTPR RGRSEGGAAD SAAYVAAVSC SDCRFKQRAL APASPGAVIR
101: SLFVSLTRRS TPRSSPSPTS ASEGDGGEGE QWRLAAADLS RRLAAATRTR DDAVEETSRL KQSLAELELK LARLEARVLP TPAAAVFPVE SFLRAVSTAR
201: ATVRNLTRAL STHLRSPASP GPNLESFLNR AFHADFELDT EGDVHTADPA GRCEANLAAY HAVAALTWEE VLVHGTKHYS DGLSRFCDAK MSEVVSSLGW
301: ARARPWPEPL LQAFFLAAKG VWGVRLLARS VHPPLPVVRV DRGARFDSRF MEDAAASRAG RLEPASVKMM VAPGFHVYVA GAGVVKCKVV CFYNNGRAGG
401: HMGGGSSGNG GEGLGGSCSD MNGGGTDAVK SCQSSRV

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.