Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G245900.1 | Wheat | plastid | 96.66 | 96.98 |
| TraesCS7D01G244400.1 | Wheat | plastid | 96.16 | 96.97 |
| HORVU7Hr1G050500.2 | Barley | endoplasmic reticulum | 73.12 | 80.51 |
| Os08t0508100-01 | Rice | plastid | 76.79 | 76.29 |
| EES14272 | Sorghum | plastid | 75.79 | 74.55 |
| Zm00001d031444_P001 | Maize | plastid | 72.62 | 72.26 |
| Zm00001d052889_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 65.78 | 65.45 |
| GSMUA_Achr9P20170_001 | Banana | cytosol | 32.89 | 59.16 |
| GSMUA_Achr9P27740_001 | Banana | cytosol, nucleus, peroxisome | 56.76 | 58.42 |
| TraesCS5B01G264800.2 | Wheat | plastid | 58.26 | 56.11 |
| GSMUA_Achr3P03800_001 | Banana | nucleus | 51.42 | 54.04 |
| Solyc01g014110.2.1 | Tomato | endoplasmic reticulum, extracellular | 6.84 | 53.95 |
| GSMUA_Achr9P12540_001 | Banana | nucleus | 49.25 | 51.39 |
| GSMUA_Achr8P25600_001 | Banana | cytosol, nucleus, peroxisome | 53.59 | 50.47 |
| CDY67745 | Canola | plastid | 30.05 | 49.32 |
| VIT_06s0004g01680.t01 | Wine grape | cytosol | 48.25 | 48.9 |
| KRH10167 | Soybean | nucleus | 46.74 | 48.44 |
| KRH23169 | Soybean | nucleus, plastid | 44.24 | 47.24 |
| KRH24675 | Soybean | nucleus | 46.41 | 47.2 |
| KRH29674 | Soybean | cytosol | 45.74 | 46.6 |
| GSMUA_Achr7P02030_001 | Banana | cytosol | 49.08 | 46.45 |
| Bra023381.1-P | Field mustard | nucleus | 35.73 | 45.53 |
| CDX85683 | Canola | nucleus | 36.23 | 45.49 |
| CDX91157 | Canola | nucleus | 35.73 | 44.96 |
| PGSC0003DMT400081474 | Potato | cytosol | 44.91 | 44.76 |
| Solyc01g006690.2.1 | Tomato | nucleus | 45.08 | 44.41 |
| PGSC0003DMT400055002 | Potato | nucleus | 45.41 | 44.16 |
| Bra008872.1-P | Field mustard | plastid | 37.73 | 43.46 |
| AT5G12900.1 | Thale cress | nucleus, plastid | 40.73 | 43.42 |
| CDY53973 | Canola | nucleus | 39.23 | 43.28 |
| CDY55867 | Canola | cytosol | 38.56 | 42.7 |
| Bra006167.1-P | Field mustard | plastid | 35.23 | 41.7 |
| CDX70481 | Canola | cytosol | 36.73 | 40.74 |
| Solyc01g014120.2.1 | Tomato | cytosol, nucleus | 19.2 | 33.43 |
| Solyc01g014380.2.1 | Tomato | nucleus | 15.86 | 31.15 |
| TraesCS4B01G224000.1 | Wheat | plastid | 19.2 | 25.96 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G145600.1 | EnsemblPlantsGene:TraesCS7B01G145600 | ncoils:Coil | PANTHER:PTHR31029 | PANTHER:PTHR31029:SF3 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:188973377..188976291
Molecular Weight (calculated)
66229.3 Da
IEP (calculated)
7.513
GRAVY (calculated)
-0.397
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEAASAPS SSSHPPAAFP ATRQEIQAAI AKATELRALH AALLQGGGAN AAACAAYADA GAGAGRSPAV IRVPPAASPA FPRAAAVAED YPVFTPAYGE
101: EPLGGMNYIR QDNRSLSENW SGIGLDHEGA EDEVAFSDLD NHNTFSSSNS ELHFSSSNEH MRNRIPRRNH HSFLHPALSA DSFLKSASRG TDSAESKATT
201: TCNTCKPATI SRDPEADANA PKNLSSAVPQ SNHHPSVGSR TRQKGTNVLS WLLPKSKRKT KSDMSPSTAE CENMSQLLKE WGVFSVESLK KELAEANEHR
301: DAALQEVGEM RSSLGELTSK LLSLEAYSIE LKKALKKATS TKNAQSHSKR SARSVGVSRD DSLPVSQEVM VEGFLQIVSE ARLSIKQFCK VLLQQVEDAD
401: NGLADKLNLL LQPYQLTLAD KHSKVILYHL EALMNQAMYQ DFENCTFQKN GSPRCFDPKQ DLQENFASFV ALRNLSWNEV LKKGTKYYCE DFSRFCDQKM
501: SCIVSTLSWS WPWAEQLLQC FFVAAKCIWL LHLLAFSFSP PLMVLRVEEN RAFDPMYMEE IQVERQRSQQ NLSRVKIMAM PGFYVQDRVL KCRVICRYS
101: EPLGGMNYIR QDNRSLSENW SGIGLDHEGA EDEVAFSDLD NHNTFSSSNS ELHFSSSNEH MRNRIPRRNH HSFLHPALSA DSFLKSASRG TDSAESKATT
201: TCNTCKPATI SRDPEADANA PKNLSSAVPQ SNHHPSVGSR TRQKGTNVLS WLLPKSKRKT KSDMSPSTAE CENMSQLLKE WGVFSVESLK KELAEANEHR
301: DAALQEVGEM RSSLGELTSK LLSLEAYSIE LKKALKKATS TKNAQSHSKR SARSVGVSRD DSLPVSQEVM VEGFLQIVSE ARLSIKQFCK VLLQQVEDAD
401: NGLADKLNLL LQPYQLTLAD KHSKVILYHL EALMNQAMYQ DFENCTFQKN GSPRCFDPKQ DLQENFASFV ALRNLSWNEV LKKGTKYYCE DFSRFCDQKM
501: SCIVSTLSWS WPWAEQLLQC FFVAAKCIWL LHLLAFSFSP PLMVLRVEEN RAFDPMYMEE IQVERQRSQQ NLSRVKIMAM PGFYVQDRVL KCRVICRYS
001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG
Arabidopsis Description
IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.