Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G245900.1 | Wheat | plastid | 97.98 | 97.49 |
| TraesCS7B01G145600.1 | Wheat | plastid | 96.97 | 96.16 |
| HORVU7Hr1G050500.2 | Barley | endoplasmic reticulum | 74.58 | 81.43 |
| Os08t0508100-01 | Rice | plastid | 77.78 | 76.62 |
| EES14272 | Sorghum | plastid | 76.09 | 74.22 |
| Zm00001d031444_P001 | Maize | plastid | 72.73 | 71.76 |
| Zm00001d052889_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 67.34 | 66.45 |
| GSMUA_Achr9P20170_001 | Banana | cytosol | 33.33 | 59.46 |
| GSMUA_Achr9P27740_001 | Banana | cytosol, nucleus, peroxisome | 57.58 | 58.76 |
| TraesCS5D01G273100.1 | Wheat | plastid | 57.41 | 55.36 |
| GSMUA_Achr3P03800_001 | Banana | nucleus | 52.19 | 54.39 |
| Solyc01g014110.2.1 | Tomato | endoplasmic reticulum, extracellular | 6.9 | 53.95 |
| GSMUA_Achr9P12540_001 | Banana | nucleus | 50.67 | 52.44 |
| GSMUA_Achr8P25600_001 | Banana | cytosol, nucleus, peroxisome | 54.21 | 50.63 |
| CDY67745 | Canola | plastid | 30.47 | 49.59 |
| VIT_06s0004g01680.t01 | Wine grape | cytosol | 48.99 | 49.24 |
| KRH10167 | Soybean | nucleus | 47.31 | 48.62 |
| KRH23169 | Soybean | nucleus, plastid | 44.78 | 47.42 |
| KRH24675 | Soybean | nucleus | 46.97 | 47.37 |
| KRH29674 | Soybean | cytosol | 46.3 | 46.77 |
| GSMUA_Achr7P02030_001 | Banana | cytosol | 49.49 | 46.45 |
| Bra023381.1-P | Field mustard | nucleus | 36.2 | 45.74 |
| CDX85683 | Canola | nucleus | 36.7 | 45.7 |
| CDX91157 | Canola | nucleus | 36.2 | 45.17 |
| PGSC0003DMT400081474 | Potato | cytosol | 45.45 | 44.93 |
| Solyc01g006690.2.1 | Tomato | nucleus | 45.79 | 44.74 |
| PGSC0003DMT400055002 | Potato | nucleus | 46.13 | 44.48 |
| AT5G12900.1 | Thale cress | nucleus, plastid | 40.91 | 43.24 |
| Bra008872.1-P | Field mustard | plastid | 37.71 | 43.08 |
| CDY53973 | Canola | nucleus | 39.23 | 42.91 |
| CDY55867 | Canola | cytosol | 38.72 | 42.51 |
| Bra006167.1-P | Field mustard | plastid | 35.69 | 41.9 |
| CDX70481 | Canola | cytosol | 37.37 | 41.11 |
| Solyc01g014120.2.1 | Tomato | cytosol, nucleus | 19.53 | 33.72 |
| Solyc01g014380.2.1 | Tomato | nucleus | 16.16 | 31.48 |
| TraesCS4D01G224300.1 | Wheat | peroxisome, plastid | 19.02 | 25.98 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G244400.1 | EnsemblPlantsGene:TraesCS7D01G244400 | ncoils:Coil | PANTHER:PTHR31029 | PANTHER:PTHR31029:SF3 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:212808611..212811420
Molecular Weight (calculated)
65834.0 Da
IEP (calculated)
8.062
GRAVY (calculated)
-0.406
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEAASGPS SSARPPAAFP ATRQEIQAAI AKATELRALH AALLQGGGAN AAACAAYAGR SPAVIRVPPA ASPAFPRAAA VAEDYPVFTP AYGEEPLGGM
101: NCIRQDNRSL SENWSGIGLD HEGAEDEVAF SDLDNHNTFS SSNSELHFSS SNEHTRNRIP RRNHHSFLHP ALSADSFLKS ASRRTDSAES KATTTCNTCK
201: PATISRGPEA DANALKNLSS VVPQSNHHPS VGSRTRQKGT NVLSWLLPKS KRKTKSDMSP STAECENMSQ LLKEWGVFSL ESLKKELAEA NEHRDAALQE
301: VGEMRSSLGE LTSKLLSLEA YSSELKKALK KATSTKNNVQ SHSKRSARSV GVSRDDSLPV SQEVMVEGFL QIVSEARLSI KQFCKVLLQQ VEDADNGLAD
401: KLSLLLQPYQ LTLADKHSKV ILYHLEALMN QAMYQDFENC TFQKNGPPRC LDPKQDLQEN FASFVALRNL SWNEVLKKGT KYYCEDFSRF CDQKMSCIVS
501: TLSWSWPWAE QLLQCFFVAA KCIWLLHLLA FSFSPPLMVL RVEENRAFDP MYMEEIQVER QRSQQNPSRV KIMAMPGFYV QDRVLKCRVI CRYS
101: NCIRQDNRSL SENWSGIGLD HEGAEDEVAF SDLDNHNTFS SSNSELHFSS SNEHTRNRIP RRNHHSFLHP ALSADSFLKS ASRRTDSAES KATTTCNTCK
201: PATISRGPEA DANALKNLSS VVPQSNHHPS VGSRTRQKGT NVLSWLLPKS KRKTKSDMSP STAECENMSQ LLKEWGVFSL ESLKKELAEA NEHRDAALQE
301: VGEMRSSLGE LTSKLLSLEA YSSELKKALK KATSTKNNVQ SHSKRSARSV GVSRDDSLPV SQEVMVEGFL QIVSEARLSI KQFCKVLLQQ VEDADNGLAD
401: KLSLLLQPYQ LTLADKHSKV ILYHLEALMN QAMYQDFENC TFQKNGPPRC LDPKQDLQEN FASFVALRNL SWNEVLKKGT KYYCEDFSRF CDQKMSCIVS
501: TLSWSWPWAE QLLQCFFVAA KCIWLLHLLA FSFSPPLMVL RVEENRAFDP MYMEEIQVER QRSQQNPSRV KIMAMPGFYV QDRVLKCRVI CRYS
001: MASSETRMNK AREKEEAIAN GVKLRALQAS LMQMKSSPSS NYSLRNPSSS SAASPASRPL PNLSAHDYPV FTPSYEDEPV SAFHHKNLTL SETWDEDGVG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG
101: LVDGDTYLSD SYKTSTSRKT VMMPHQDSHH HVYTMSDALR SPPLHFYTTG RSNCGSVDFR SVSSCNDYNK QKGFDTKSLK SSNLVVPLTD SHSAVVSSQP
201: RNRGGRVMSW LFPKLKKKQK SNSIFNSPSI TEKSEEVSEV LKDSGSGVEK LKRELMEANR SRDAALTQVS EMKSSLGELS EKLQYLESYC DNLKKALREA
301: TEVVSQENSG GRSSGKKNSE MPVSEEVMVE GFLQIVSEAR LSIKQFLKTL VSEIDEEDST LIGNINTLLQ PHNLSFTSKY SKIIQYHLEA IISQSVYQDF
401: ENCVFQKNGK PKLLDPEQDR QANFSSFASL RNLSWNEVLK KGTKYYSDEF SRFCDEKMSL IITTLNWTRP WSEQMLQAFF VAAKCVWLLH LLAFSFNPAL
501: GILRVEENRE FESSFMEDMG ADRQRSALSR GPARVKVMVM PGFYVLDRVL RCKVLCRYKS LG
Arabidopsis Description
IRKIIRK-interacting protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LXU9]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.