Factsheet for TraesCS3B01G376200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5A01G265200.2
TraesCS5A01G382800.2
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5B01G264800.2
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1
TraesCS5D01G273100.1
TraesCS7A01G245900.1
TraesCS7B01G145600.1
TraesCS7D01G244400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56370.1	TraesCS5A01G265200.2	AT5G12900.1	15618632
AT3G56370.1	TraesCS5B01G264800.2	AT5G12900.1	15618632
AT3G56370.1	TraesCS5D01G273100.1	AT5G12900.1	15618632
AT3G56370.1	TraesCS7A01G245900.1	AT5G12900.1	15618632
AT3G56370.1	TraesCS7B01G145600.1	AT5G12900.1	15618632
AT3G56370.1	TraesCS7D01G244400.1	AT5G12900.1	15618632
AT5G01890.1	TraesCS1A01G308700.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS1A01G308800.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS1B01G319300.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS1D01G308000.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS2B01G113800.2	AT2G41090.1	17360592
AT5G01890.1	TraesCS3A01G184500.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3A01G191900.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3A01G335000.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3B01G219900.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3B01G365900.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3D01G188600.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3D01G194500.2	AT2G41090.1	17360592
AT5G01890.1	TraesCS3D01G328300.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS4B01G131100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS4D01G126100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5A01G057100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5A01G057200.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5A01G139700.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5B01G059900.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5B01G137100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5D01G068000.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5D01G068100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5D01G153400.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5A01G382800.2	AT4G14640.1	17360592
AT5G01890.1	TraesCS1A01G308700.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS1A01G308800.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS1B01G319300.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS1D01G308000.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS2B01G113800.2	AT5G21274.1	17360592
AT5G01890.1	TraesCS3A01G184500.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3A01G191900.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3A01G335000.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3B01G219900.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3B01G365900.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3D01G188600.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3D01G194500.2	AT5G21274.1	17360592
AT5G01890.1	TraesCS3D01G328300.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS4B01G131100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS4D01G126100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5A01G057100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5A01G057200.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5A01G139700.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5B01G059900.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5B01G137100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5D01G068000.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5D01G068100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5D01G153400.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G337800.1	Wheat	plasma membrane	98.94	98.73
TraesCS3A01G344300.1	Wheat	plasma membrane	89.96	97.59
HORVU3Hr1G081050.3	Barley	plastid	83.83	94.52
Os01t0821900-01	Rice	peroxisome, plasma membrane	71.56	87.35
EES03806	Sorghum	plasma membrane	86.36	86.18
Zm00001d043058_P001	Maize	plasma membrane	84.04	83.77
GSMUA_Achr9P04820_001	Banana	plasma membrane	49.47	59.85
GSMUA_Achr6P32490_001	Banana	plasma membrane	48.1	59.4
TraesCS4B01G169900.1	Wheat	plasma membrane	59.2	57.38
PGSC0003DMT400042952	Potato	plasma membrane	53.81	56.94
Solyc06g048950.2.1	Tomato	plasma membrane	53.59	56.71
CDY27220	Canola	plasma membrane	54.33	54.91
CDX72142	Canola	plasma membrane	54.02	54.59
VIT_08s0058g01340.t01	Wine grape	plasma membrane	53.7	54.33
Bra007241.1-P	Field mustard	plasma membrane	55.07	54.33
AT3G56370.1	Thale cress	plasma membrane	55.18	54.15
PGSC0003DMT400070944	Potato	plasma membrane	54.97	53.66
KRH00443	Soybean	cytosol, nucleus	52.54	53.44
Solyc06g048620.2.1	Tomato	plasma membrane	54.76	53.35
KRH64211	Soybean	plasma membrane	54.97	53.17
KRH53723	Soybean	plasma membrane	54.65	52.86
KRH40729	Soybean	plasma membrane	53.49	52.33
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	37.42	51.3
VIT_13s0067g03050.t01	Wine grape	plasma membrane	56.24	51.15
KRH76129	Soybean	plasma membrane	51.8	50.57
PGSC0003DMT400068892	Potato	plasma membrane	49.47	49.89
Solyc09g015520.2.1	Tomato	plasma membrane	50.53	49.53
KRH65414	Soybean	plasma membrane	50.74	49.48
CDY04822	Canola	plasma membrane	47.99	48.92
AT5G01890.1	Thale cress	plasma membrane	48.41	47.36
TraesCS4B01G320600.1	Wheat	plasma membrane	33.93	36.07
TraesCS7B01G069800.2	Wheat	plasma membrane	29.6	28.69
TraesCS6B01G366900.1	Wheat	plasma membrane	27.91	26.45

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF07714	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF162
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G376200	EnsemblPlants:TraesCS3B01G376200.1	TIGR:cd14066
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:592530472..592533828

Molecular Weight (calculated)

100540.0 Da

IEP (calculated)

6.688

GRAVY (calculated)

0.121

Length

946 amino acids

Sequence
(BLAST)

001: MAAFAPALLL LLLAAAAATA TTTTALTDDV LALVVFKTGV ADPLGRLARW TEDDDRPCSW PGVGCDARAG RVTSLSLPAA SLSGRLPRAL LRLDALLSLS
101: LPRNNLSGPV LPGLLASLPR LRSLDLASNR LAATVPADLF AQCRDIRTIS LAHNELSGYI PPAVASCSSL LSLNLSSNRL AGPIPDGIWS LPSLRSLDLS
201: GNSLSGSVPG GFPRSSSLRA LDLSRNLFAG EIPADVGEAA LLKSLDLGRN FFTGGLPDSL RRLTALRFLG AGSNALAGEV PAWIGEMWSL ERLDLSGNRF
301: AGVIPDDIAK CKNLLEADLS RNALTGELPW WVFGLPLQRV SVAGNKLDGW VKVPGDAALA LHVLDLSSNA FSGGIPPQIT AFAGLQFLNL SSNSISGQLP
401: AGIGGMRLLE VLDVSANTLT GSVPPEIGGA VALRVLRMGD NSLTGRIPAQ IGSCSSLVAL DLSHNDITGP IPSTLGNLTS LQAVDLSQNK LNGTLPVELS
501: NLPSLHIFDV SHNLLSGNLP NSRFFDNIPD YFLSDNSGLC SSRKNNSCGA VMPKPIVLNP NSSSNPLSQS TPSSPSSKHH KKIILSVSTL IAIAGGAAIA
601: IGVITVTVLN RRVRAAASHP KPAIALSDDY LSQSPENDAS SGKLVMFGKG SPEFSTGGHA LLNKDCELGR GGFGAVYKTV LRDGQPVAIK KLTVSSLVKS
701: KDDFERQVKV LSKMRHHNIV TLRGFYWTSS LQLLIYDYLP GGNLHKHLHE CTEENTLSWM ERFDIIIGVA RGLMHLHQHG VVHYNLKSSN VLLDSNGEPR
801: VGDYGLASLL PMLDRYVLSS KIQSALGYMA PEFACKTVKI TEKCDVYGFG VLALEILTGR RPVEYLEDDV VVLCDLVRSA LEEGRLEDCM DPRLCGEFAM
901: EEAIPIIKLG LVCTSQVPSN RPDMGEVLSI LDVVRSPQDS PGDEMV

Best Arabidopsis Sequence Match ( AT3G56370.1 )
(BLAST)

001: MYKALIFTVL LVSAVAPVRS LDPPLNDDVL GLIVFKADLR DPEQKLASWN EDDYTPCSWN GVKCHPRTNR VTELNLDGFS LSGRIGRGLL QLQFLHKLSL
101: SNNNLTGIIN PNMLLSLVNL KVVDLSSNGL SGSLPDEFFR QCGSLRVLSL AKNKLTGKIP VSISSCSSLA ALNLSSNGFS GSMPLGIWSL NTLRSLDLSR
201: NELEGEFPEK IDRLNNLRAL DLSRNRLSGP IPSEIGSCML LKTIDLSENS LSGSLPNTFQ QLSLCYSLNL GKNALEGEVP KWIGEMRSLE TLDLSMNKFS
301: GQVPDSIGNL LALKVLNFSG NGLIGSLPVS TANCINLLAL DLSGNSLTGK LPMWLFQDGS RDVSALKNDN STGGIKKIQV LDLSHNAFSG EIGAGLGDLR
401: DLEGLHLSRN SLTGPIPSTI GELKHLSVLD VSHNQLNGMI PRETGGAVSL EELRLENNLL EGNIPSSIKN CSSLRSLILS HNKLLGSIPP ELAKLTRLEE
501: VDLSFNELAG TLPKQLANLG YLHTFNISHN HLFGELPAGG IFNGLSPSSV SGNPGICGAV VNKSCPAISP KPIVLNPNAT FDPYNGEIVP PGAGHKRILL
601: SISSLIAISA AAAIVVGVIA ITVLNLRVRA STVSRSAVPL TFSGGDDFSR SPTTDSNSGK LVMFSGEPDF STGTHALLNK DCELGRGGFG AVYRTVIRDG
701: YPVAIKKLTV SSLVKSQDEF EREVKKLGKL RHSNLVKLEG YYWTTSLQLL IYEFLSGGSL YKQLHEAPGG NSSLSWNDRF NIILGTAKCL AYLHQSNIIH
801: YNIKSSNVLL DSSGEPKVGD YGLARLLPML DRYVLSSKIQ SALGYMAPEF ACRTVKITEK CDVYGFGVLV LEVVTGKKPV EYMEDDVVVL CDMVREALED
901: GRADECIDPR LQGKFPVEEA VAVIKLGLIC TSQVPSSRPH MGEAVNILRM IRCPSGSSDE LGSS

Arabidopsis Description

IRKProbable LRR receptor-like serine/threonine-protein kinase IRK [Source:UniProtKB/Swiss-Prot;Acc:Q9LY03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.