Factsheet for TraesCS3A01G344300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5A01G265200.2
TraesCS5A01G382800.2
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5B01G264800.2
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1
TraesCS5D01G273100.1
TraesCS7A01G245900.1
TraesCS7B01G145600.1
TraesCS7D01G244400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56370.1	TraesCS5A01G265200.2	AT5G12900.1	15618632
AT3G56370.1	TraesCS5B01G264800.2	AT5G12900.1	15618632
AT3G56370.1	TraesCS5D01G273100.1	AT5G12900.1	15618632
AT3G56370.1	TraesCS7A01G245900.1	AT5G12900.1	15618632
AT3G56370.1	TraesCS7B01G145600.1	AT5G12900.1	15618632
AT3G56370.1	TraesCS7D01G244400.1	AT5G12900.1	15618632
AT5G01890.1	TraesCS1A01G308700.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS1A01G308800.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS1B01G319300.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS1D01G308000.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS2B01G113800.2	AT2G41090.1	17360592
AT5G01890.1	TraesCS3A01G184500.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3A01G191900.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3A01G335000.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3B01G219900.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3B01G365900.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3D01G188600.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS3D01G194500.2	AT2G41090.1	17360592
AT5G01890.1	TraesCS3D01G328300.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS4B01G131100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS4D01G126100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5A01G057100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5A01G057200.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5A01G139700.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5B01G059900.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5B01G137100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5D01G068000.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5D01G068100.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5D01G153400.1	AT2G41090.1	17360592
AT5G01890.1	TraesCS5A01G382800.2	AT4G14640.1	17360592
AT5G01890.1	TraesCS1A01G308700.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS1A01G308800.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS1B01G319300.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS1D01G308000.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS2B01G113800.2	AT5G21274.1	17360592
AT5G01890.1	TraesCS3A01G184500.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3A01G191900.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3A01G335000.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3B01G219900.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3B01G365900.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3D01G188600.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS3D01G194500.2	AT5G21274.1	17360592
AT5G01890.1	TraesCS3D01G328300.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS4B01G131100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS4D01G126100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5A01G057100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5A01G057200.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5A01G139700.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5B01G059900.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5B01G137100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5D01G068000.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5D01G068100.1	AT5G21274.1	17360592
AT5G01890.1	TraesCS5D01G153400.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G376200.1	Wheat	plasma membrane	97.59	89.96
TraesCS3D01G337800.1	Wheat	plasma membrane	97.59	89.77
HORVU3Hr1G081050.3	Barley	plastid	81.65	84.86
Os01t0821900-01	Rice	peroxisome, plasma membrane	70.18	78.97
EES03806	Sorghum	plasma membrane	84.63	77.85
Zm00001d043058_P001	Maize	plasma membrane	82.11	75.45
GSMUA_Achr9P04820_001	Banana	plasma membrane	50.34	56.14
GSMUA_Achr6P32490_001	Banana	plasma membrane	48.62	55.35
TraesCS4A01G135200.1	Wheat	plasma membrane	58.83	52.72
PGSC0003DMT400042952	Potato	plasma membrane	53.1	51.79
Solyc06g048950.2.1	Tomato	plasma membrane	52.75	51.45
Bra028916.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	40.6	51.3
VIT_08s0058g01340.t01	Wine grape	plasma membrane	53.55	49.95
CDY27220	Canola	plasma membrane	53.21	49.57
KRH64211	Soybean	plasma membrane	55.39	49.39
CDX72142	Canola	plasma membrane	52.98	49.36
KRH00443	Soybean	cytosol, nucleus	52.64	49.35
PGSC0003DMT400070944	Potato	plasma membrane	54.82	49.33
Bra007241.1-P	Field mustard	plasma membrane	54.01	49.11
Solyc06g048620.2.1	Tomato	plasma membrane	54.59	49.02
AT3G56370.1	Thale cress	plasma membrane	54.13	48.96
KRH53723	Soybean	plasma membrane	54.82	48.88
KRH40729	Soybean	plasma membrane	53.21	47.98
VIT_13s0067g03050.t01	Wine grape	plasma membrane	55.85	46.83
KRH76129	Soybean	plasma membrane	51.61	46.44
PGSC0003DMT400068892	Potato	plasma membrane	49.66	46.16
Solyc09g015520.2.1	Tomato	plasma membrane	50.46	45.6
KRH65414	Soybean	plasma membrane	50.46	45.36
CDY04822	Canola	plasma membrane	47.25	44.4
AT5G01890.1	Thale cress	plasma membrane	47.71	43.02
TraesCS3A01G495400.1	Wheat	plasma membrane	42.78	35.29
TraesCS5A01G491400.1	Wheat	plasma membrane	33.03	32.32
TraesCS7A01G164000.1	Wheat	plasma membrane	28.1	25.08
TraesCS7A01G066200.1	Wheat	plasma membrane	27.29	24.24
TraesCS4A01G422700.1	Wheat	plasma membrane	27.18	24.09
TraesCS6A01G336300.1	Wheat	plasma membrane	27.06	23.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF07714
PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF162
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G344300	EnsemblPlants:TraesCS3A01G344300.1	TIGR:cd14066	SEG:seg

Description

No Description!

Coordinates

chr3A:-:593701446..593705112

Molecular Weight (calculated)

92301.6 Da

IEP (calculated)

7.106

GRAVY (calculated)

0.103

Length

872 amino acids

Sequence
(BLAST)

001: MAASASAPAL LLLLLAAAAA AATTTTALXX XXXXXVVFKT GVADPLGRLA KWTEDDDRPC TWPGVGCDAR AGRVTSLSLP AASLSGRLPR ALLRLDALLS
101: LSLPRNNLSG PVLPGLLASL PRLRSLDLAS NRLAATVPAD LFAQCRDIRT ISLAHNELSG YIPPAALLKS LDLGRNFFTG GLPDSLRRLT ALRFLGAGSN
201: ALAGEVPAWI GEMWSLERLD LSGNRFAGVI PDDIAKCKNL LEADLSRNAL TGELPWWVFG LPLQRVSVAG NKLDGWVKVP GDAALALHVL DLSSNAFSGG
301: IPPQITAFAG LQFLNLSSNS ISGQLPAGIG GMRLLEVLDV SANTLTGSVP PEIGGAVALR VLRMGDNSLT GRIPAQIGSC NSLVALDLSH NDITGPIPST
401: LGNLTSLQAV DLSQNRLNGT LPVELSNLPS LHIFDVSHNL LSGNLPNSRF FDNIPNYFLS DNSGLCSSRK NNSCGVVMPK PIVLNPNSSS NPLSQSTPSS
501: PSSKHHKKII LSVSTLIAIA GGAAIAFGVI TVTVLNRRVR AAASHPKPAI ALSDDYLSQS PENDASSGKL VMFGKGSPEF STGGHALLNK DCELGRGGFG
601: AVYKTVLRDG QPVAIKKLTV SSLVKSKDDF ERQVKVLSKM RHHNIVTLRG FYWTSSLQLL IYDYLPGGNL HKHLHECTDE NTLSWMERFD IIIGVARGLM
701: HLHQHGVVHY NLKSSNVLLD SNGEPRVGDY GLASLLPMLD RYVLSSKIQS ALGYMAPEFA CKTVKITEKC DVYGFGVLAL EILTGRRPVE YLEDDVVVLC
801: DLVRSALEEG RLEDCMDPRL CGEFPMEEAI PIIKLGLVCT SQVPSNRPDM GEVLSILEVV RSPQDSPGDE MV

Best Arabidopsis Sequence Match ( AT1G12460.1 )
(BLAST)

001: MRKVHLFLVL VHFIYISTSR SDSISERDIL LQFKGSISDD PYNSLASWVS DGDLCNSFNG ITCNPQGFVD KIVLWNTSLA GTLAPGLSNL KFIRVLNLFG
101: NRFTGNLPLD YFKLQTLWTI NVSSNALSGP IPEFISELSS LRFLDLSKNG FTGEIPVSLF KFCDKTKFVS LAHNNIFGSI PASIVNCNNL VGFDFSYNNL
201: KGVLPPRICD IPVLEYISVR NNLLSGDVSE EIQKCQRLIL VDLGSNLFHG LAPFAVLTFK NITYFNVSWN RFGGEIGEIV DCSESLEFLD ASSNELTGRI
301: PTGVMGCKSL KLLDLESNKL NGSIPGSIGK MESLSVIRLG NNSIDGVIPR DIGSLEFLQV LNLHNLNLIG EVPEDISNCR VLLELDVSGN DLEGKISKKL
401: LNLTNIKILD LHRNRLNGSI PPELGNLSKV QFLDLSQNSL SGPIPSSLGS LNTLTHFNVS YNNLSGVIPP VPMIQAFGSS AFSNNPFLCG DPLVTPCNSR
501: GAAAKSRNSD ALSISVIIVI IAAAVILFGV CIVLALNLRA RKRRKDEEIL TVETTPLASS IDSSGVIIGK LVLFSKNLPS KYEDWEAGTK ALLDKENIIG
601: MGSIGSVYRA SFEGGVSIAV KKLETLGRIR NQEEFEQEIG RLGGLQHPNL SSFQGYYFSS TMQLILSEFV PNGSLYDNLH LRIFPGTSSS YGNTDLNWHR
701: RFQIALGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVMDSFGL TKKFHNAVGY IAPELAQQSL RASEKCDVYS YGVVLLELVT
801: GRKPVESPSE NQVLILRDYV RDLLETGSAS DCFDRRLREF EENELIQVMK LGLLCTSENP LKRPSMAEVV QVLESIRNGF GS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:UniProtKB/Swiss-Prot;Acc:C0LGE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.