Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G12900.1 | CDX72142 | AT3G56370.1 | 15618632 |
| AT5G12900.1 | CDY27220 | AT3G56370.1 | 15618632 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006167.1-P | Field mustard | plastid | 94.79 | 68.38 |
| Solyc01g014110.2.1 | Tomato | endoplasmic reticulum, extracellular | 13.97 | 67.11 |
| CDX70481 | Canola | cytosol | 96.16 | 65.0 |
| CDX85683 | Canola | nucleus | 78.63 | 60.17 |
| CDX91157 | Canola | nucleus | 75.89 | 58.19 |
| CDY55867 | Canola | cytosol | 83.01 | 56.01 |
| CDY53973 | Canola | nucleus | 83.01 | 55.8 |
| AT5G12900.1 | Thale cress | nucleus, plastid | 82.47 | 53.56 |
| GSMUA_Achr9P20170_001 | Banana | cytosol | 46.58 | 51.05 |
| CDY19343 | Canola | cytosol | 13.97 | 47.22 |
| KRH10167 | Soybean | nucleus | 62.74 | 39.62 |
| VIT_06s0004g01680.t01 | Wine grape | cytosol | 64.11 | 39.59 |
| KRH24675 | Soybean | nucleus | 63.01 | 39.05 |
| KRH23169 | Soybean | nucleus, plastid | 59.45 | 38.68 |
| KRH29674 | Soybean | cytosol | 61.64 | 38.27 |
| Solyc01g006690.2.1 | Tomato | nucleus | 63.29 | 37.99 |
| PGSC0003DMT400055002 | Potato | nucleus | 63.29 | 37.5 |
| PGSC0003DMT400081474 | Potato | cytosol | 58.9 | 35.77 |
| GSMUA_Achr3P03800_001 | Banana | nucleus | 53.42 | 34.21 |
| GSMUA_Achr9P27740_001 | Banana | cytosol, nucleus, peroxisome | 54.52 | 34.19 |
| HORVU5Hr1G073320.1 | Barley | nucleus | 48.77 | 33.78 |
| GSMUA_Achr9P12540_001 | Banana | nucleus | 52.6 | 33.45 |
| Os08t0508100-01 | Rice | plastid | 52.33 | 31.68 |
| EES14272 | Sorghum | plastid | 52.33 | 31.36 |
| GSMUA_Achr8P25600_001 | Banana | cytosol, nucleus, peroxisome | 54.25 | 31.13 |
| TraesCS7D01G244400.1 | Wheat | plastid | 49.59 | 30.47 |
| Zm00001d031444_P001 | Maize | plastid | 50.14 | 30.4 |
| EER99087 | Sorghum | plastid | 49.04 | 30.34 |
| TraesCS7A01G245900.1 | Wheat | plastid | 49.59 | 30.32 |
| Zm00001d020937_P001 | Maize | plastid | 48.49 | 30.2 |
| Zm00001d052889_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 49.59 | 30.07 |
| TraesCS7B01G145600.1 | Wheat | plastid | 49.32 | 30.05 |
| Os09t0488800-01 | Rice | plastid | 49.86 | 29.74 |
| Zm00001d006025_P001 | Maize | plastid | 49.04 | 29.49 |
| GSMUA_Achr7P02030_001 | Banana | cytosol | 50.41 | 29.07 |
| TraesCS5D01G273100.1 | Wheat | plastid | 49.04 | 29.06 |
| CDY53856 | Canola | cytosol, plastid | 24.93 | 28.8 |
| HORVU7Hr1G050500.2 | Barley | endoplasmic reticulum | 42.74 | 28.68 |
| TraesCS5B01G264800.2 | Wheat | plastid | 48.77 | 28.62 |
| TraesCS5A01G265200.2 | Wheat | plastid | 48.77 | 28.48 |
| CDY31261 | Canola | nucleus, plastid | 36.99 | 28.24 |
| CDY21046 | Canola | nucleus, plastid | 33.7 | 27.77 |
| HORVU5Hr1G073290.4 | Barley | cytosol, nucleus, plastid | 48.77 | 27.73 |
| CDX98071 | Canola | nucleus, plastid | 33.42 | 26.35 |
| CDY30072 | Canola | nucleus, plastid | 35.62 | 25.29 |
| Solyc01g014120.2.1 | Tomato | cytosol, nucleus | 15.62 | 16.57 |
| Solyc01g014380.2.1 | Tomato | nucleus | 10.14 | 12.13 |
Protein Annotations
| EnsemblPlants:CDY67745 | EnsemblPlantsGene:GSBRNA2T00066122001 | ncoils:Coil | PANTHER:PTHR31029 | PANTHER:PTHR31029:SF3 | ProteinID:CDY67745 |
| ProteinID:CDY67745.1 | UniParc:UPI0004EE308D | UniProt:A0A078JMS4 | MapMan:35.1 | : | : |
Description
BnaCnng56180DBnaCnng56180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMS4]
Coordinates
chrLK036466:+:377..1897
Molecular Weight (calculated)
42099.6 Da
IEP (calculated)
8.751
GRAVY (calculated)
-0.445
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLNNSNLVV PLTDSHSVVV SSHPRNRGGR VMSWLFPKLK RNPNRTDISE EVFKDSGSGI EKLKRELMEA KKSREAALTQ VSEMKSSLGE FKEKLQYLES
101: YCDGLKKALR EAVSREKNSE MMPVSEDVMV EGFLQIVSES RLSIKQFLKT LVTEIDEEDS NLISNINALL QPHNLSFTSK HSKTIQYHLE AIISQSVHQD
201: FENCVFQKNG KPKLLDQEQE RQANFSSFAS LRNLSWSEVL KKGTKYYSEE FSSFCDEKMS LIITRLKWTR PWSEEMLQAF FVAAKCVWLL HLLAFSFKPA
301: LGILRVEENR EFETSYMEDM GADRDRQRSL TSRGPAWVKV MVMPGFYVQD RVLRCKVLCR YKSLG
101: YCDGLKKALR EAVSREKNSE MMPVSEDVMV EGFLQIVSES RLSIKQFLKT LVTEIDEEDS NLISNINALL QPHNLSFTSK HSKTIQYHLE AIISQSVHQD
201: FENCVFQKNG KPKLLDQEQE RQANFSSFAS LRNLSWSEVL KKGTKYYSEE FSSFCDEKMS LIITRLKWTR PWSEEMLQAF FVAAKCVWLL HLLAFSFKPA
301: LGILRVEENR EFETSYMEDM GADRDRQRSL TSRGPAWVKV MVMPGFYVQD RVLRCKVLCR YKSLG
001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG
Arabidopsis Description
Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.