Factsheet for HORVU7Hr1G050500.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G081050.3
HORVU4Hr1G050250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G12900.1	HORVU3Hr1G081050.3	AT3G56370.1	15618632
AT5G12900.1	HORVU4Hr1G050250.1	AT3G56370.1	15618632

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G244400.1	Wheat	plastid	81.43	74.58
TraesCS7A01G245900.1	Wheat	plastid	81.07	73.87
TraesCS7B01G145600.1	Wheat	plastid	80.51	73.12
Os08t0508100-01	Rice	plastid	70.4	63.52
EES14272	Sorghum	plastid	68.38	61.08
Zm00001d031444_P001	Maize	plastid	65.07	58.8
Zm00001d052889_P001	Maize	cytosol, nucleus, peroxisome, plastid	61.21	55.32
GSMUA_Achr9P20170_001	Banana	cytosol	31.8	51.95
HORVU5Hr1G073320.1	Barley	nucleus	49.08	50.66
GSMUA_Achr9P27740_001	Banana	cytosol, nucleus, peroxisome	49.45	46.22
GSMUA_Achr3P03800_001	Banana	nucleus	46.88	44.74
CDY67745	Canola	plastid	28.68	42.74
HORVU5Hr1G073290.4	Barley	cytosol, nucleus, plastid	49.82	42.21
GSMUA_Achr9P12540_001	Banana	nucleus	44.49	42.16
GSMUA_Achr8P25600_001	Banana	cytosol, nucleus, peroxisome	46.51	39.78
VIT_06s0004g01680.t01	Wine grape	cytosol	41.18	37.9
KRH10167	Soybean	nucleus	40.26	37.89
GSMUA_Achr7P02030_001	Banana	cytosol	43.57	37.44
KRH23169	Soybean	nucleus, plastid	37.87	36.72
CDX85683	Canola	nucleus	32.17	36.69
Bra023381.1-P	Field mustard	nucleus	31.62	36.6
KRH24675	Soybean	nucleus	39.52	36.5
Bra008872.1-P	Field mustard	plastid	34.56	36.15
CDX91157	Canola	nucleus	31.62	36.13
KRH29674	Soybean	cytosol	38.79	35.88
PGSC0003DMT400081474	Potato	cytosol	38.79	35.11
PGSC0003DMT400055002	Potato	nucleus	39.71	35.06
Solyc01g006690.2.1	Tomato	nucleus	39.15	35.03
AT5G12900.1	Thale cress	nucleus, plastid	36.03	34.88
CDY53973	Canola	nucleus	34.74	34.81
Bra006167.1-P	Field mustard	plastid	32.35	34.78
CDY55867	Canola	cytosol	34.01	34.2
CDX70481	Canola	cytosol	32.35	32.59
Solyc01g014120.2.1	Tomato	cytosol, nucleus	14.89	23.55
Solyc01g014380.2.1	Tomato	nucleus	11.76	20.98
Solyc01g014110.2.1	Tomato	endoplasmic reticulum, extracellular	2.76	19.74
HORVU4Hr1G063050.1	Barley	mitochondrion	4.04	8.33

Protein Annotations

EnsemblPlants:HORVU7Hr1G050500.2	EnsemblPlantsGene:HORVU7Hr1G050500	ncoils:Coil	PANTHER:PTHR31029	PANTHER:PTHR31029:SF3	SEG:seg
UniParc:UPI000B47E0C5	UniProt:A0A287WG05	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:182576901..182578701

Molecular Weight (calculated)

55036.0 Da

IEP (calculated)

7.399

GRAVY (calculated)

-0.424

Length

544 amino acids

Sequence
(BLAST)

001: HVCIVTQITL SGISFFFSNT RQNAHHFVLE QRCKEESLQH AYGEEPLGGM NYIRQDNRSL SENWSGIGLE HEGPEDEVAF SDLDNHNTFS SSNSELHFSS
101: SNEHIRNRIP RRNHHSFLHP ALSADSFLKS ASRRTDSAES KATTTCNTCK PATISRGPEA DANAVKNLSS GVPQSNHHPS VGSRTRQKGT NVLSWLLPKS
201: KRKTKSDMSP STAECENMSQ LLKEWGVFSL ESLKKELAEA NEHRDAALQE VGEMRSSLGE LTSKLLSLEA YSSELKKTLK KATSTKNSVQ SHSKRSARSV
301: GVSRDDSLPV SHEVMVEGFL QVVSEARLSI KQFCKVLLQQ VEDADNGLAD KLNLLLQPYQ LTLADKLSKV ILYHLEALMN QAMYQDFENC TFQKNGSPRC
401: LDPKQDLQEN FASFVALRNL SWNEVLKKGT KYYCEDFSRF CDQKMSCIVS TLSWSWPWAE QLLQCFFVAA KCIWLLHLLA FSFSPPLMVX XXXXXXXXXX
501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXX

Best Arabidopsis Sequence Match ( AT1G12330.1 )
(BLAST)

001: MAPSSSSSPS KSPVPSLHQS LHFTPILECE EDDLQEERYK NRATPSSDGG SSATPNHQHH RRTNSNNNHQ HTLTPLHHNG KPQTRKRHDD NDEDDGGAVS
101: CNKCRPHHSH RDKFSVVPLE SHNNPSFISS PNLIIKSIFQ SLTRRSPKPS SATAALPPRS SSSSAADASR EEQWRLAVAE LSHKLIQATK KKEDAVIEAS
201: RLKSSMAELE KKLNKLEIYC HNLKSGLDEC SNKKQSVPIR KDGFNDRIIQ QFLVSVSESR SSIRALSRSL ASQLRTVGGK VYERLSLLLQ PFDVKINSFA
301: KNPKSLIFYL EAILSRAFFE DFEAPGFQKN GSTRILNPID RCESNYASFN VLMELTWDEV LSRGTKHFSE EFSRFCDRKM SDVVSMLSWN RAWPEPLLQA
401: FFGASKSVWL VHLLANSVNP GLQIFRVEKD DRFDPIYMEE TGGERFKSLV RAMVQPGFYV YGSVVKCKVV CKQCGSDEEE LEDHTVKECN KNDKSLISIC
501: SPLGG

Arabidopsis Description

Cyclin-dependent kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.