Factsheet for GSMUA_Achr5P10330_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P03780_001	Banana	plasma membrane	69.31	74.53
VIT_00s1764g00020.t01	Wine grape	cytosol, peroxisome	41.18	63.35
Os03t0127700-02	Rice	plasma membrane	65.81	54.88
TraesCS5A01G491400.1	Wheat	plasma membrane	63.39	52.86
TraesCS4D01G317100.1	Wheat	plasma membrane	63.26	52.75
TraesCS4B01G320600.1	Wheat	plasma membrane	63.12	52.7
PGSC0003DMT400010074	Potato	plasma membrane	62.45	52.61
EER95591	Sorghum	plasma membrane	62.85	52.24
Zm00001d027463_P001	Maize	plasma membrane	63.12	52.0
Zm00001d048453_P001	Maize	plastid	63.12	51.82
Solyc08g079740.2.1	Tomato	plasma membrane	61.51	51.81
KRH77441	Soybean	plasma membrane	61.78	51.81
KRH27994	Soybean	plasma membrane	61.1	51.36
CDY30082	Canola	cytosol	52.49	50.91
HORVU4Hr1G083020.3	Barley	plasma membrane	61.64	50.83
Os10t0531700-00	Rice	plasma membrane	54.51	50.5
CDX98061	Canola	plasma membrane	58.41	50.47
AT1G62950.1	Thale cress	plasma membrane	60.3	50.34
AT1G12460.1	Thale cress	plasma membrane	59.35	50.0
Bra019768.1-P	Field mustard	plasma membrane	58.95	49.21
CDY45475	Canola	cytosol	13.46	49.02
HORVU4Hr1G003680.1	Barley	plasma membrane	39.97	44.73
HORVU3Hr1G116330.2	Barley	cytosol, mitochondrion	35.94	39.85
GSMUA_Achr9P04820_001	Banana	plasma membrane	35.8	34.02
GSMUA_Achr6P32490_001	Banana	plasma membrane	33.78	32.77
GSMUA_Achr9P01740_001	Banana	plasma membrane	33.24	32.08
GSMUA_Achr5P29680_001	Banana	plasma membrane	32.3	32.04
GSMUA_Achr6P27930_001	Banana	plasma membrane	30.82	31.5
GSMUA_Achr6P06620_001	Banana	plasma membrane	31.9	29.92
GSMUA_Achr4P19570_001	Banana	cytosol	12.38	29.49
GSMUA_Achr7P02290_001	Banana	plasma membrane	32.3	24.69
GSMUA_Achr4P19580_001	Banana	cytosol, nucleus, plasma membrane	18.17	22.58

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G10330_001	EnsemblPlants:GSMUA_Achr5P10330_001
EnsemblPlants:GSMUA_Achr5T10330_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0SXB2	PFAM:PF00069	PFAM:PF08263
PFAM:PF13855	PFscan:PS50011	PANTHER:PTHR45268	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029616BA	SEG:seg	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Source:GMGC_GENE;Acc:GSMUA_Achr5G10330_001]

Coordinates

chr5:+:7391108..7393854

Molecular Weight (calculated)

79719.5 Da

IEP (calculated)

5.673

GRAVY (calculated)

0.246

Length

743 amino acids

Sequence
(BLAST)

001: MRICRYLFSL VVVVVVFSGS APPVAEASTS EKEILLEFKS NVTSDPGGAL ASWVAAGDPC RDFAGVFCND AGSVVKILVH GANLAGAIPA SLSGLGSLQI
101: ISLFGNRFSG GVPPEFAAIQ TLHKLNVSRN ALSGGVPGFL GGLPGLRLLD LSYNVFSGEI PAALFSQCVK TRFVSLSHNA LSGPIPADIA NCSRLVGIDL
201: DNSLSGTVTD KISMCQSLEL FDLGSNSFSG TVPFNLLSLQ NLSYFNMSSN KFQGEIPEVT NCGALRFLDL GLNNLSGSIP LEIGSLKSLS ILDIQNLQLF
301: GEIPITLSQC RFLLELDASG NRLAGGIPDT LYNMTYLKHL DLHRNQLNGI IPPTLGQLSK LEYLDLSENL LTGVIPDSLG GLTLLTFFNV SYNNLSGAIP
401: SATTIQQFGP SAFLNNSLLC GPPLTTPCSS GNVSRRTRLL TVPAIIAIVA AAIILIGVCI VTVMNIRAYG KKVVEEEILT LPSRYEDWEA GTKALLDKDC
501: MVGGGSIGTV YKATFEGGVS IAVKKLESLG RIRNQEEFEQ EIGRLGSLGH PNLVAFHGYY WSSTMQLILS EFVPNGNLYD HLHVSRLLHL NVKSTNILLD
601: EGYEAKLSDY GLGKLLPILG SYALTKFHTA VGYVAPELAS QSLRYSDKCD VYSFGVVLLE IVTGRKPVES PGAAKVVVLQ DYVRGVLEDG TASDCFDRNM
701: RGFLETELIQ VLKLGLICTS ETPSRRPRMA EVVQFLESIR PSS

Best Arabidopsis Sequence Match ( AT1G62950.1 )
(BLAST)

001: MQIGKLIWVI MFIFVHIIIT SSRSFSDSII TEREILLQFK DNINDDPYNS LASWVSNADL CNSFNGVSCN QEGFVEKIVL WNTSLAGTLT PALSGLTSLR
101: VLTLFGNRIT GNLPLDYLKL QTLWKINVSS NALSGLVPEF IGDLPNLRFL DLSKNAFFGE IPNSLFKFCY KTKFVSLSHN NLSGSIPESI VNCNNLIGFD
201: FSYNGITGLL PRICDIPVLE FVSVRRNLLS GDVFEEISKC KRLSHVDIGS NSFDGVASFE VIGFKNLTYF NVSGNRFRGE IGEIVDCSES LEFLDASSNE
301: LTGNVPSGIT GCKSLKLLDL ESNRLNGSVP VGMGKMEKLS VIRLGDNFID GKLPLELGNL EYLQVLNLHN LNLVGEIPED LSNCRLLLEL DVSGNGLEGE
401: IPKNLLNLTN LEILDLHRNR ISGNIPPNLG SLSRIQFLDL SENLLSGPIP SSLENLKRLT HFNVSYNNLS GIIPKIQASG ASSFSNNPFL CGDPLETPCN
501: ALRTGSRSRK TKALSTSVII VIIAAAAILV GICLVLVLNL RARKRRKKRE EEIVTFDTTT PTQASTESGN GGVTFGKLVL FSKSLPSKYE DWEAGTKALL
601: DKDNIIGIGS IGAVYRASFE GGVSIAVKKL ETLGRIRNQE EFEQEIGRLG SLSHPNLASF QGYYFSSTMQ LILSEFVTNG SLYDNLHPRV SHRTSSSSSS
701: HGNTELNWHR RFQIAVGTAK ALSFLHNDCK PAILHLNVKS TNILLDERYE AKLSDYGLEK FLPVLNSSGL TKFHNAVGYI APELAQSLRV SDKCDVYSYG
801: VVLLELVTGR KPVESPSENE VVILRDHVRN LLETGSASDC FDRRLRGFEE NELIQVMKLG LICTTENPLK RPSIAEVVQV LELIRNGMES

Arabidopsis Description

F16P17.10 protein [Source:UniProtKB/TrEMBL;Acc:Q9LQ11]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.